Msp_g08977


Description : not classified & original description: none


Gene families : OG0008222 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008222_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g08977

Target Alias Description ECC score Gene Family Method Actions
Adi_g002273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31294 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g32224 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g11861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011475 No alias not classified & original description: CDS=1-573 0.05 OrthoFinder output from all 47 species
Ceric.34G020300.1 Ceric.34G020300 not classified & original description: pacid=50622640... 0.08 OrthoFinder output from all 47 species
Ehy_g06465 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
GSVIVT01038189001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os09g34140.2 LOC_Os09g34140 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g02582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g07262 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10434413g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pir_g06460 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g14970 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc12g019550.2.1 Solyc12g019550 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Tin_g17065 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e034712_P001 Zm00001e034712 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034311 diol metabolic process IEP HCCA
BP GO:0034312 diol biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046146 tetrahydrobiopterin metabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!