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  5. Msp_g08988

Msp_g08988


Description : not classified & original description: none


Gene families : OG0003467 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003467_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g08988
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00213680 evm_27.TU.AmTr_v1... Reticulon-like protein B18 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT2G20590 No alias Reticulon family protein 0.03 OrthoFinder output from all 47 species
Als_g15679 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g08418 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11427 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0030.g024361 No alias not classified & original description: CDS=126-2093 0.03 OrthoFinder output from all 47 species
Cba_g05841 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.35G033400.1 Ceric.35G033400 not classified & original description: pacid=50581205... 0.03 OrthoFinder output from all 47 species
Dac_g01665 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dcu_g02951 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g06377 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30457 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os08g17870.1 LOC_Os08g17870 Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Nbi_g18960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo405772 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
Solyc07g005470.4.1 Solyc07g005470 Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc12g010120.2.1 Solyc12g010120 Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e022248_P002 Zm00001e022248 Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003388 Reticulon 376 528
No external refs found!