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  5. Msp_g09118

Msp_g09118


Description : protein involved in PS-II assembly *(RBD1) & original description: none


Gene families : OG0005565 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005565_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g09118
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00123650 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
AT1G54500 No alias Rubredoxin-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g001061 No alias protein involved in PS-II assembly *(RBD1) & original... 0.07 OrthoFinder output from all 47 species
Aev_g02854 No alias protein involved in PS-II assembly *(RBD1) & original... 0.03 OrthoFinder output from all 47 species
Ala_g25461 No alias protein involved in PS-II assembly *(RBD1) & original... 0.05 OrthoFinder output from all 47 species
Als_g13490 No alias protein involved in PS-II assembly *(RBD1) & original... 0.08 OrthoFinder output from all 47 species
Aob_g05676 No alias protein involved in PS-II assembly *(RBD1) & original... 0.06 OrthoFinder output from all 47 species
Aspi01Gene26833.t1 Aspi01Gene26833 protein involved in PS-II assembly *(RBD1) & original... 0.06 OrthoFinder output from all 47 species
Azfi_s0017.g014438 No alias protein involved in PS-II assembly *(RBD1) & original... 0.04 OrthoFinder output from all 47 species
Ceric.13G098300.1 Ceric.13G098300 protein involved in PS-II assembly *(RBD1) & original... 0.04 OrthoFinder output from all 47 species
Cre07.g315150 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Dac_g14889 No alias protein involved in PS-II assembly *(RBD1) & original... 0.05 OrthoFinder output from all 47 species
Ehy_g03089 No alias protein involved in PS-II assembly *(RBD1) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g11378 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_24370 No alias RBD1 protein involved in PS-II assembly 0.05 OrthoFinder output from all 47 species
LOC_Os08g23410.1 LOC_Os08g23410 RBD1 protein involved in PS-II assembly 0.03 OrthoFinder output from all 47 species
Len_g02652 No alias protein involved in PS-II assembly *(RBD1) & original... 0.05 OrthoFinder output from all 47 species
MA_158671g0010 No alias RBD1 protein involved in PS-II assembly 0.02 OrthoFinder output from all 47 species
Mp5g13990.1 No alias RBD1 protein involved in PS-II assembly 0.08 OrthoFinder output from all 47 species
Ore_g09698 No alias protein involved in PS-II assembly *(RBD1) & original... 0.03 OrthoFinder output from all 47 species
Pir_g09214 No alias protein involved in PS-II assembly *(RBD1) & original... 0.05 OrthoFinder output from all 47 species
Pnu_g21356 No alias protein involved in PS-II assembly *(RBD1) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g10145 No alias protein involved in PS-II assembly *(RBD1) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s1254.g027977 No alias protein involved in PS-II assembly *(RBD1) & original... 0.06 OrthoFinder output from all 47 species
Spa_g09611 No alias protein involved in PS-II assembly *(RBD1) & original... 0.04 OrthoFinder output from all 47 species
Spa_g22961 No alias protein involved in PS-II assembly *(RBD1) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e006086_P001 Zm00001e006086 RBD1 protein involved in PS-II assembly 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006817 phosphate ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR024935 Rubredoxin_dom 91 137
No external refs found!