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  5. Msp_g09221

Msp_g09221


Description : not classified & original description: none


Gene families : OG0000423 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000423_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g09221
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00041900 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00305p00015080 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT5G48270 No alias Plant protein of unknown function (DUF868) 0.03 OrthoFinder output from all 47 species
Adi_g107946 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g02472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07263 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene03849.t1 Aspi01Gene03849 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56074.t1 Aspi01Gene56074 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0050.g031071 No alias not classified & original description: CDS=1-1164 0.03 OrthoFinder output from all 47 species
Cba_g13694 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.07G011400.1 Ceric.07G011400 not classified & original description: pacid=50626447... 0.03 OrthoFinder output from all 47 species
Ceric.11G038000.1 Ceric.11G038000 not classified & original description: pacid=50595952... 0.03 OrthoFinder output from all 47 species
Dcu_g07613 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_16460 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g59200.1 LOC_Os03g59200 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g03809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g10138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01318 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11190 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001399 No alias not classified & original description: CDS=1-1068 0.02 OrthoFinder output from all 47 species
Sam_g00921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR008586 DUF868_pln 25 323
No external refs found!