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  5. Msp_g09964

Msp_g09964 (PUB18, ATPUB18)


Aliases : PUB18, ATPUB18

Description : not classified & original description: none


Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g09964

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00086p00031680 evm_27.TU.AmTr_v1... U-box domain-containing protein 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00153p00035720 ATPUB17, PUB17,... U-box domain-containing protein 1 OS=Medicago truncatula 0.02 OrthoFinder output from all 47 species
Adi_g082530 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38714 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene10525.t1 ATPUB17, PUB17,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0060.g034769 PUB13, ATPUB13 E3 ubiquitin ligase & original description: CDS=1-2214 0.02 OrthoFinder output from all 47 species
Azfi_s0497.g073607 PUB12, AtPUB12 not classified & original description: CDS=1-549 0.02 OrthoFinder output from all 47 species
Ceric.19G008100.1 PUB25, Ceric.19G008100 not classified & original description: pacid=50576706... 0.04 OrthoFinder output from all 47 species
Dac_g08066 ATPUB17, PUB17 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Gb_08792 ATPUB17, PUB17 U-box domain-containing protein 1 OS=Medicago truncatula... 0.02 OrthoFinder output from all 47 species
LOC_Os02g13960.1 ATPUB17, PUB17,... U-box domain-containing protein 4 OS=Oryza sativa subsp.... 0.06 OrthoFinder output from all 47 species
LOC_Os12g38210.1 PUB13, ATPUB13,... E3 ubiquitin ligase (PUB) 0.01 OrthoFinder output from all 47 species
Len_g46759 PUB13, ATPUB13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07136 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g11295 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g12544 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g35847 PUB14, ATPUB14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26740 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g28259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013821 No alias not classified & original description: CDS=1-987 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020085 PUB13, ATPUB13 not classified & original description: CDS=359-691 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020568 PUB13, ATPUB13 E3 ubiquitin ligase & original description: CDS=347-2224 0.01 OrthoFinder output from all 47 species
Tin_g00546 PUB14, ATPUB14 not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR000225 Armadillo 38 77
No external refs found!