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  5. Msp_g09973

Msp_g09973 (HVA22F)


Aliases : HVA22F

Description : not classified & original description: none


Gene families : OG0000842 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000842_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g09973
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00253210 HVA22F,... HVA22-like protein f OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT2G42820 HVA22F HVA22-like protein F 0.03 OrthoFinder output from all 47 species
AT5G62490 ATHVA22B, HVA22B HVA22 homologue B 0.04 OrthoFinder output from all 47 species
Ala_g26506 HVA22F not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31945 ATHVA22A, HVA22A not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g11936 HVA22F not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g10178 ATHVA22A, HVA22A not classified & original description: none 0.15 OrthoFinder output from all 47 species
Aop_g18111 HVA22F not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G053300.1 HVA22F, Ceric.08G053300 not classified & original description: pacid=50637741... 0.13 OrthoFinder output from all 47 species
Ceric.13G028300.1 HVA22F, Ceric.13G028300 not classified & original description: pacid=50636869... 0.05 OrthoFinder output from all 47 species
Dac_g12350 ATHVA22A, HVA22A not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g17301 HVA22F not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000808001 HVA22F HVA22-like protein f OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01020012001 ATHVA22A, HVA22A HVA22-like protein a OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_16303 HVA22F HVA22-like protein f OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os09g27730.1 LOC_Os09g27730 Protein HVA22 OS=Hordeum vulgare (sp|q07764|hva22_horvu : 114.0) 0.03 OrthoFinder output from all 47 species
MA_113124g0010 HVA22F HVA22-like protein f OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_62010g0010 HVA22F HVA22-like protein f OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp3g15420.1 HVA22E, ATHVA22E HVA22-like protein f OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g10087 HVA22F not classified & original description: none 0.17 OrthoFinder output from all 47 species
Ppi_g50646 HVA22F not classified & original description: none 0.09 OrthoFinder output from all 47 species
Smo417586 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc06g072680.4.1 HVA22E,... Protein HVA22 OS=Hordeum vulgare (sp|q07764|hva22_horvu : 148.0) 0.05 OrthoFinder output from all 47 species
Spa_g54280 ATHVA22A, HVA22A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009930_P001 HVA22D,... Protein HVA22 OS=Hordeum vulgare (sp|q07764|hva22_horvu : 161.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR004345 TB2_DP1_HVA22 32 105
No external refs found!