Msp_g10126

Description : subunit zeta *(CCT6) of CCT chaperonin folding complex & original description: none

Gene families : OG0003995 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003995_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g10126

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00116290	evm_27.TU.AmTr_v1...	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.03	OrthoFinder output from all 47 species
AMTR_s00010p00016450	evm_27.TU.AmTr_v1...	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.02	OrthoFinder output from all 47 species
AT3G02530	No alias	TCP-1/cpn60 chaperonin family protein	0.04	OrthoFinder output from all 47 species
Adi_g117522	No alias	subunit zeta *(CCT6) of CCT chaperonin folding complex &...	0.03	OrthoFinder output from all 47 species
Ceric.16G067100.1	Ceric.16G067100	subunit zeta *(CCT6) of CCT chaperonin folding complex &...	0.05	OrthoFinder output from all 47 species
Cre09.g397200	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.01	OrthoFinder output from all 47 species
GSVIVT01031067001	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.03	OrthoFinder output from all 47 species
Gb_18443	No alias	CCT6 subunit zeta of CCT chaperonin folding complex	0.04	OrthoFinder output from all 47 species
LOC_Os05g05470.1	LOC_Os05g05470	CCT6 subunit zeta of CCT chaperonin folding complex	0.02	OrthoFinder output from all 47 species
MA_8438g0020	No alias	CCT6 subunit zeta of CCT chaperonin folding complex	0.02	OrthoFinder output from all 47 species
Ore_g33910	No alias	subunit zeta *(CCT6) of CCT chaperonin folding complex &...	0.04	OrthoFinder output from all 47 species
Solyc02g063090.3.1	Solyc02g063090	CCT6 subunit zeta of CCT chaperonin folding complex	0.02	OrthoFinder output from all 47 species
Tin_g00936	No alias	subunit zeta *(CCT6) of CCT chaperonin folding complex &...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/GroEL/TCP-1	29	528

External Links

No external refs found!

Msp_g10126

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation