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  5. Msp_g10425

Msp_g10425


Description : RNA helicase Prp43 of Intron-Lariat Spliceosome complex & original description: none


Gene families : OG0000184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g10425

Target Alias Description ECC score Gene Family Method Actions
Adi_g107993 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07016 No alias RNA helicase *(Prp22) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g27060 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07921 ESP3, EMB2733 RNA helicase *(Prp2) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g11041 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0237.g059557 No alias RNA helicase Prp43 of Intron-Lariat Spliceosome complex... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000796.23 No alias Probable pre-mRNA-splicing factor ATP-dependent RNA... 0.01 OrthoFinder output from all 47 species
Dac_g44524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14595 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29092 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g35794 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10217744g0010 No alias Pre-mRNA-splicing factor ATP-dependent RNA helicase... 0.03 OrthoFinder output from all 47 species
Msp_g00692 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g03727 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR011709 DEAD-box_helicase_OB_fold 604 680
IPR011545 DEAD/DEAH_box_helicase_dom 61 213
IPR007502 Helicase-assoc_dom 454 542
IPR001650 Helicase_C 260 391
No external refs found!