Msp_g10982


Description : not classified & original description: none


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g10982

Target Alias Description ECC score Gene Family Method Actions
Adi_g009351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g084995 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g00814 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp4g23510.1 No alias Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006081 No alias not classified & original description: CDS=1-825 0.03 OrthoFinder output from all 47 species
Solyc10g083460.1.1 Solyc10g083460 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
Spa_g02339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0017006 protein-tetrapyrrole linkage IEP HCCA
BP GO:0017007 protein-bilin linkage IEP HCCA
BP GO:0017009 protein-phycocyanobilin linkage IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030490 maturation of SSU-rRNA IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0030686 90S preribosome IEP HCCA
CC GO:0030688 preribosome, small subunit precursor IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002653 Znf_A20 22 44
IPR000058 Znf_AN1 196 231
No external refs found!