Msp_g11341


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g11341

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00075660 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.03 OrthoFinder output from all 47 species
AT1G03540 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G03380 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G06540 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G37570 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g005281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g07948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g47897 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g07818 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g17504 OTP81 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g24343 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g24404 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g31168 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g33512 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35641 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35743 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g36549 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g38464 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g03860 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04279 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g18934 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18943 CRR21 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18957 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g62062 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27582 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g37575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37587 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g42859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03544 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g04190 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g07474 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g13396 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16119 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16780 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17269 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23571 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23672 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g23676 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23798 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g26165 No alias ssDNA-binding protein *(OSB) & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g27362 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28322 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28392 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28699 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29955 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33090 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g33107 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g33219 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g33237 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g33370 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g33538 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g36004 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36072 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g59647 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g63625 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67863 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67888 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68032 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g68111 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene64841.t1 Aspi01Gene64841 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19787 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g20154 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20479 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g20635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20788 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26541 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g32521 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g37893 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g75230 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75248 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g04996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g33014 EMB2261 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g43221 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g08533 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g16544 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g35959 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g35988 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g38858 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g06719 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g15906 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16074 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01028747001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01036788001 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Gb_24633 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 OrthoFinder output from all 47 species
LOC_Os03g64370.1 LOC_Os03g64370 Pentatricopeptide repeat-containing protein At5g52850,... 0.03 OrthoFinder output from all 47 species
LOC_Os08g33700.1 LOC_Os08g33700 Pentatricopeptide repeat-containing protein At3g47530... 0.02 OrthoFinder output from all 47 species
Len_g05397 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g34148 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_121102g0010 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_7907g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.07 OrthoFinder output from all 47 species
Mp8g01790.1 No alias ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Msp_g19405 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g22344 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28505 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g29094 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g30253 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g38614 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g46446 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g48395 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g03803 VAC1, ECB2, ATECB2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g08399 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g15566 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g22141 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g34904 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02728 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g02847 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g03088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03413 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03417 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g05695 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g07329 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g13434 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18006 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g48482 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g57079 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g57368 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g57707 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57931 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g59601 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63208 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63393 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63512 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63640 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63898 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g66342 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g54672 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g22472 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Smo133320 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Smo74749 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species
Smo92456 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Solyc07g008480.3.1 Solyc07g008480 Pentatricopeptide repeat-containing protein At3g14730... 0.03 OrthoFinder output from all 47 species
Spa_g01739 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18381 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23985 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g24048 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g24976 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28134 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g29295 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g39240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53139 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53142 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57155 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10922 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g17298 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g17792 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g22905 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g35237 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g44089 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44639 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g44700 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 698 757
IPR046848 E_motif 791 853
IPR002885 Pentatricopeptide_repeat 168 215
IPR002885 Pentatricopeptide_repeat 373 400
IPR002885 Pentatricopeptide_repeat 244 269
IPR002885 Pentatricopeptide_repeat 446 471
IPR002885 Pentatricopeptide_repeat 648 670
IPR002885 Pentatricopeptide_repeat 547 572
IPR002885 Pentatricopeptide_repeat 474 504
IPR002885 Pentatricopeptide_repeat 272 298
IPR002885 Pentatricopeptide_repeat 575 603
IPR002885 Pentatricopeptide_repeat 345 370
No external refs found!