Description : E3 ubiquitin ligase component *(HRD1) of ER-associated protein degradation (ERAD) machinery & original description: none
Gene families : OG0003518 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003518_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Msp_g11446 | |
| Cluster | HCCA: Cluster_71 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Ala_g10350 | No alias | E3 ubiquitin ligase component *(HRD1) of ER-associated... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g08599 | No alias | E3 ubiquitin ligase component *(HRD1) of ER-associated... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.11G081400.1 | Ceric.11G081400 | E3 ubiquitin ligase component *(HRD1) of ER-associated... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g05911 | No alias | E3 ubiquitin ligase component *(HRD1) of ER-associated... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g24365 | No alias | E3 ubiquitin ligase component *(HRD1) of ER-associated... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g08347 | No alias | E3 ubiquiTin ligase component *(HRD1) of ER-associated... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005643 | nuclear pore | IEP | HCCA |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| CC | GO:0070939 | Dsl1/NZR complex | IEP | HCCA |
| CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 291 | 330 |
| No external refs found! |
