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  5. Msp_g11675

Msp_g11675


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g11675
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00240430 OSB3,... RNA biosynthesis.organelle machineries.RNA polymerase... 0.02 OrthoFinder output from all 47 species
Aev_g06254 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g42051 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17143 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67727 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Azfi_s0013.g013171 SLO1 not classified & original description: CDS=1-1446 0.05 OrthoFinder output from all 47 species
Cba_g06022 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07018 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29864 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g29871 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g04861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37938 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07713 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g36056 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g39614 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
GSVIVT01027504001 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.07 OrthoFinder output from all 47 species
Len_g17706 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g20858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g30589 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g39535 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g46092 OTP86 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g23761 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g23480 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32824 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g54471 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63793 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g28438 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g33092 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35656 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 48 72
IPR002885 Pentatricopeptide_repeat 11 37
No external refs found!