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  5. Msp_g11880

Msp_g11880


Description : RsmH-type rRNA methyltransferase *(CMAL) & original description: none


Gene families : OG0006770 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006770_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g11880

Target Alias Description ECC score Gene Family Method Actions
AT5G10910 No alias mraW methylase family protein 0.02 OrthoFinder output from all 47 species
GSVIVT01035599001 No alias No description available 0.03 OrthoFinder output from all 47 species
Ore_g30320 No alias RsmH-type rRNA methyltransferase *(CMAL) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR002903 RsmH 125 400
No external refs found!