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  5. Msp_g12108

Msp_g12108 (PMIT1, NRAMP1, ATNRAMP1)


Aliases : PMIT1, NRAMP1, ATNRAMP1

Description : metal cation transporter *(NRAMP) & original description: none


Gene families : OG0000603 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000603_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g12108
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AT4G18790 ATNRAMP5, NRAMP5 NRAMP metal ion transporter family protein 0.02 OrthoFinder output from all 47 species
Adi_g059631 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g10005 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18301 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g46660 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07848 ATNRAMP4, NRAMP4 metal cation transporter *(NRAMP) & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g30659 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12684 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007529 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original... 0.04 OrthoFinder output from all 47 species
Ceric.14G048600.1 PMIT1, NRAMP1,... metal cation transporter *(NRAMP) & original... 0.03 OrthoFinder output from all 47 species
Dac_g09351 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11760 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37580 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09672 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003954001 NRAMP6, ATNRAMP6 Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Gb_30457 ATNRAMP3, NRAMP3 metal cation transporter (NRAMP) 0.03 OrthoFinder output from all 47 species
LOC_Os02g03900.1 PMIT1, NRAMP1,... metal cation transporter (NRAMP) 0.04 OrthoFinder output from all 47 species
Len_g04748 ATNRAMP4, NRAMP4 metal cation transporter *(NRAMP) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g01765 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430197g0030 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter (NRAMP) 0.03 OrthoFinder output from all 47 species
MA_884894g0010 NRAMP6, ATNRAMP6 Metal transporter Nramp5 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Mp4g20480.1 NRAMP6, ATNRAMP6 metal cation transporter (NRAMP) 0.01 OrthoFinder output from all 47 species
Pnu_g00739 ATNRAMP4, NRAMP4 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03067 ATNRAMP4, NRAMP4 metal cation transporter *(NRAMP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g28944 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55045 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06506 No alias metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Smo417169 ATNRAMP4, NRAMP4 Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
Solyc03g116900.3.1 NRAMP6,... metal cation transporter (NRAMP) 0.03 OrthoFinder output from all 47 species
Solyc11g018530.2.1 PMIT1, NRAMP1,... metal cation transporter (NRAMP) 0.02 OrthoFinder output from all 47 species
Tin_g12817 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e011161_P002 PMIT1, NRAMP1,... metal cation transporter (NRAMP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046873 metal ion transmembrane transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR001046 NRAMP_fam 38 399
No external refs found!