Aliases : LHCA2
Description : component *(LHCa2) of LHC-I complex & original description: none
Gene families : OG0000742 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000742_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00264770 | CAB4, LHCA4,... | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00013p00180670 | LHCA2,... | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00131p00114510 | evm_27.TU.AmTr_v1... | Photosystem I chlorophyll a/b-binding protein 6,... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G19150 | LHCA2*1, LHCA6 | photosystem I light harvesting complex gene 6 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G47470 | CAB4, LHCA4 | light-harvesting chlorophyll-protein complex I subunit A4 | 0.05 | OrthoFinder output from all 47 species | |
| AT3G61470 | LHCA2 | photosystem I light harvesting complex gene 2 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g001938 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g113731 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g04468 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g05867 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g00950 | LHCA5 | linker protein *(LHCa5) between PS-I complex and NDH... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g07082 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g02952 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g08832 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g01073 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g12147 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g13138 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g36261 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene25390.t1 | LHCA5, Aspi01Gene25390 | linker protein *(LHCa5) between PS-I complex and NDH... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene37279.t1 | LHCA2, Aspi01Gene37279 | component *(LHCa2) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene65950.t1 | LHCA2, Aspi01Gene65950 | component *(LHCa2) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06305 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g15852 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g36933 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.21G064400.1 | CAB4, LHCA4,... | component *(LHCa4) of LHC-I complex & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.22G073900.1 | LHCA2, Ceric.22G073900 | component *(LHCa2) of LHC-I complex & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.28G031700.1 | LHCA2, Ceric.28G031700 | component *(LHCa2) of LHC-I complex & original... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.33G037200.1 | CAB4, LHCA4,... | component *(LHCa4) of LHC-I complex & original... | 0.05 | OrthoFinder output from all 47 species | |
| Cre06.g272650 | LHCA5 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.02 | OrthoFinder output from all 47 species | |
| Cre06.g278213 | CAB4, LHCA4 | Chlorophyll a-b binding protein P4, chloroplastic... | 0.04 | OrthoFinder output from all 47 species | |
| Cre10.g425900 | CAB4, LHCA4 | Chlorophyll a-b binding protein 4, chloroplastic... | 0.04 | OrthoFinder output from all 47 species | |
| Cre10.g452050 | CAB4, LHCA4 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.04 | OrthoFinder output from all 47 species | |
| Cre16.g687900 | LHCA5 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g04958 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g21646 | LHCA5 | linker protein *(LHCa5) between PS-I complex and NDH... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g02371 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g03606 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g29671 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g34548 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g45197 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Dde_g02029 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g08226 | LHCA5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01007988001 | CAB4, LHCA4 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01010483001 | LHCA2 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01015045001 | LHCA2*1, LHCA6 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_08408 | CAB4, LHCA4 | component LHCa4 of LHC-I complex | 0.03 | OrthoFinder output from all 47 species | |
| Gb_25594 | LHCA5 | Photosystem I chlorophyll a/b-binding protein 5,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_32082 | LHCA2 | component LHCa2 of LHC-I complex | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g38960.1 | LHCA2, LOC_Os07g38960 | component LHCa2 of LHC-I complex | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g33820.1 | CAB4, LHCA4,... | component LHCa4 of LHC-I complex | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g26810.1 | LOC_Os09g26810 | component LHCa6 of LHC-I complex | 0.04 | OrthoFinder output from all 47 species | |
| Len_g12015 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g17260 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| MA_65346g0010 | CAB4, LHCA4 | Chlorophyll a-b binding protein P4, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g07840.1 | CAB4, LHCA4 | component LHCa4 of LHC-I complex | 0.02 | OrthoFinder output from all 47 species | |
| Mp8g13180.1 | LHCA2 | component LHCa2 of LHC-I complex | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g00555 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g00735 | LHCA5 | linker protein *(LHCa5) between PS-I complex and NDH... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g05658 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g07782 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g07783 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g43266 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g43267 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g19768 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g08290 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pp3c4_11854V3.1 | LHCA5, Pp3c4_11854 | photosystem I light harvesting complex gene 5 | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g12016 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g18284 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0074.g017225 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g10927 | No alias | component *(LHCa4) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16961 | No alias | component *(LHCa4) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g40409 | No alias | component *(LHCa2) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo270427 | CAB4, LHCA4 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.04 | OrthoFinder output from all 47 species | |
| Smo403333 | LHCA5 | Photosystem I chlorophyll a/b-binding protein 5,... | 0.02 | OrthoFinder output from all 47 species | |
| Smo446130 | LHCA2 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g115900.4.1 | CAB4, LHCA4,... | component LHCa4 of LHC-I complex | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g069730.3.1 | CAB4, LHCA4,... | component LHCa4 of LHC-I complex | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g006230.3.1 | LHCA2, Solyc10g006230 | component LHCa2 of LHC-I complex | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g04945 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g08046 | LHCA5 | linker protein *(LHCa5) between PS-I complex and NDH... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g11550 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g04383 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g10537 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e004129_P001 | CAB4, LHCA4,... | component LHCa4 of LHC-I complex | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e022453_P001 | CAB4, LHCA4,... | component LHCa4 of LHC-I complex | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e035349_P002 | LHCA2, Zm00001e035349 | component LHCa2 of LHC-I complex | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004655 | porphobilinogen synthase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006298 | mismatch repair | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006631 | fatty acid metabolic process | IEP | HCCA |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009767 | photosynthetic electron transport chain | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
| BP | GO:0017038 | protein import | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0022900 | electron transport chain | IEP | HCCA |
| MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022796 | Chloroa_b-bind | 65 | 231 |
| No external refs found! |
