1. Home
  2. Species
  3. Microlepia speluncae
  4. Sequence
  5. Msp_g12905

Msp_g12905 (GIK)


Aliases : GIK

Description : AHL clade-B transcription factor & original description: none


Gene families : OG0000325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000325_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g12905
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00189120 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 20... 0.03 OrthoFinder output from all 47 species
AMTR_s00012p00257450 AHL20,... AT-hook motif nuclear-localized protein 20... 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00135580 AHL20,... AT-hook motif nuclear-localized protein 23... 0.04 OrthoFinder output from all 47 species
AMTR_s00135p00017880 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 17... 0.03 OrthoFinder output from all 47 species
AT3G55560 AHL15, AGF2 AT-hook protein of GA feedback 2 0.03 OrthoFinder output from all 47 species
AT3G60870 AHL18 AT-hook motif nuclear-localized protein 18 0.04 OrthoFinder output from all 47 species
AT4G12050 No alias Predicted AT-hook DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT4G14465 AHL20 AT-hook motif nuclear-localized protein 20 0.02 OrthoFinder output from all 47 species
AT4G17800 No alias Predicted AT-hook DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT4G22810 No alias Predicted AT-hook DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT4G35390 AGF1 AT-hook protein of GA feedback 1 0.04 OrthoFinder output from all 47 species
Adi_g035569 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055780 No alias AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058667 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15839 No alias AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g16583 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36054 AHL22 AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g29083 AHL22 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33101 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g64278 AHL22 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40424.t1 AHL22, Aspi01Gene40424 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0215.g058469 No alias AHL clade-A transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g04471 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G093400.1 Ceric.04G093400 AHL clade-A transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.1Z164900.1 Ceric.1Z164900 AHL clade-A transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.31G027400.1 AHL22, Ceric.31G027400 AHL clade-A transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.38G019000.1 Ceric.38G019000 AHL clade-A transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g25872 No alias AHL clade-A transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g42758 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g27973 No alias AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g30775 GIK AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05590 AHL20 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29218 No alias AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g31564 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019932001 No alias AT-hook motif nuclear-localized protein 24... 0.03 OrthoFinder output from all 47 species
GSVIVT01036210001 AHL20 AT-hook motif nuclear-localized protein 19... 0.04 OrthoFinder output from all 47 species
Gb_15730 No alias AT-hook motif nuclear-localized protein 16... 0.02 OrthoFinder output from all 47 species
Gb_34320 AHL22 AT-hook motif nuclear-localized protein 24... 0.03 OrthoFinder output from all 47 species
LOC_Os01g72450.1 GIK, LOC_Os01g72450 AT-hook motif nuclear-localized protein 17... 0.03 OrthoFinder output from all 47 species
LOC_Os02g25020.1 LOC_Os02g25020 AT-hook motif nuclear-localized protein 22... 0.06 OrthoFinder output from all 47 species
LOC_Os02g48320.3 AHL27, ORE7,... AT-hook motif nuclear-localized protein 25... 0.05 OrthoFinder output from all 47 species
LOC_Os03g16350.1 AHL22, LOC_Os03g16350 AT-hook motif nuclear-localized protein 22... 0.03 OrthoFinder output from all 47 species
LOC_Os04g50030.1 LOC_Os04g50030 AT-hook motif nuclear-localized protein 23... 0.03 OrthoFinder output from all 47 species
LOC_Os06g04540.1 LOC_Os06g04540 AT-hook motif nuclear-localized protein 24... 0.02 OrthoFinder output from all 47 species
LOC_Os08g06320.1 LOC_Os08g06320 AT-hook motif nuclear-localized protein 23... 0.03 OrthoFinder output from all 47 species
LOC_Os08g44910.1 AHL20, LOC_Os08g44910 AT-hook motif nuclear-localized protein 20... 0.02 OrthoFinder output from all 47 species
LOC_Os09g28930.1 LOC_Os09g28930 AT-hook motif nuclear-localized protein 17... 0.02 OrthoFinder output from all 47 species
Len_g06050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_19068g0010 AHL20 AT-hook motif nuclear-localized protein 20... 0.04 OrthoFinder output from all 47 species
MA_284g0020 AHL22 AT-hook motif nuclear-localized protein 23... 0.02 OrthoFinder output from all 47 species
MA_77661g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g18120.1 AHL20 AT-hook motif nuclear-localized protein 20... 0.02 OrthoFinder output from all 47 species
Ore_g14039 AHL22 AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25202 AHL22 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19085 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g22220 AHL27, ORE7, ESC AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g37811 AHL15, AGF2 AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g42640 AHL22 AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g43187 AHL22 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g21765 No alias AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05146 No alias AHL clade-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g12074 AHL22 AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g49267 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61776 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005976 No alias AHL clade-A transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Solyc07g056300.1.1 Solyc07g056300 AT-hook motif nuclear-localized protein 16... 0.03 OrthoFinder output from all 47 species
Solyc08g007560.3.1 AHL22, Solyc08g007560 AT-hook motif nuclear-localized protein 22... 0.02 OrthoFinder output from all 47 species
Solyc08g077010.1.1 Solyc08g077010 AT-hook motif nuclear-localized protein 23... 0.03 OrthoFinder output from all 47 species
Solyc08g079720.3.1 AHL22, Solyc08g079720 AT-hook motif nuclear-localized protein 22... 0.02 OrthoFinder output from all 47 species
Solyc09g089620.1.1 AHL20, Solyc09g089620 AT-hook motif nuclear-localized protein 20... 0.04 OrthoFinder output from all 47 species
Solyc11g006090.3.1 AHL20, Solyc11g006090 AT-hook motif nuclear-localized protein 19... 0.04 OrthoFinder output from all 47 species
Spa_g30290 AHL22 AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g01806 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10420 GIK AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001193_P001 AHL20, Zm00001e001193 AT-hook motif nuclear-localized protein 22... 0.02 OrthoFinder output from all 47 species
Zm00001e003878_P001 AHL20, Zm00001e003878 AT-hook motif nuclear-localized protein 20... 0.03 OrthoFinder output from all 47 species
Zm00001e007105_P001 Zm00001e007105 AT-hook motif nuclear-localized protein 23... 0.03 OrthoFinder output from all 47 species
Zm00001e009975_P001 Zm00001e009975 AT-hook motif nuclear-localized protein 17... 0.05 OrthoFinder output from all 47 species
Zm00001e014298_P001 AHL22, Zm00001e014298 AT-hook motif nuclear-localized protein 22... 0.03 OrthoFinder output from all 47 species
Zm00001e016254_P001 AHL20, Zm00001e016254 AT-hook motif nuclear-localized protein 20... 0.03 OrthoFinder output from all 47 species
Zm00001e022037_P001 AHL20, Zm00001e022037 AT-hook motif nuclear-localized protein 20... 0.03 OrthoFinder output from all 47 species
Zm00001e024863_P001 AHL22, Zm00001e024863 AT-hook motif nuclear-localized protein 23... 0.02 OrthoFinder output from all 47 species
Zm00001e036564_P001 AHL22, Zm00001e036564 AT-hook motif nuclear-localized protein 22... 0.02 OrthoFinder output from all 47 species
Zm00001e041402_P001 Zm00001e041402 AT-hook motif nuclear-localized protein 21... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0031167 rRNA methylation IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP HCCA
BP GO:0070475 rRNA base methylation IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
InterPro domains Description Start Stop
IPR005175 PPC_dom 230 345
No external refs found!