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  5. Msp_g12962

Msp_g12962


Description : component *(uS17c) of small plastid ribosomal-subunit proteome & original description: none


Gene families : OG0002325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002325_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g12962

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00201470 RPS17, CS17,... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Ala_g13255 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Als_g47206 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Aop_g43549 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Azfi_s0430.g069336 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Cre02.g118950 emb1129 Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Dac_g17145 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.13 OrthoFinder output from all 47 species
Dde_g25473 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ehy_g07306 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Gb_07769 RPS17, CS17, PRPS17 component psRPS17 of small ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Lfl_g10801 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Nbi_g24135 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Ore_g06145 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pp3c11_14630V3.1 RPS17, CS17,... ribosomal protein S17 0.02 OrthoFinder output from all 47 species
Sam_g47246 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Solyc03g120630.4.1 RPS17, CS17,... component psRPS17 of small ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Spa_g48114 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016851 magnesium chelatase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP HCCA
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR000266 Ribosomal_S17/S11 75 142
No external refs found!