Msp_g13253


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g13253

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00214930 CRR22,... Pentatricopeptide repeat-containing protein At1g11290,... 0.01 OrthoFinder output from all 47 species
AT1G15510 VAC1, ECB2, ATECB2 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G18750 DOT4 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G03800 emb1899, EMB175, EMB166 Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g005534 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g008203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g009422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g009543 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g010668 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g013425 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036621 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g050950 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g051856 RARE1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055244 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057083 EMB2758 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g066672 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g075417 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g097815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099249 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g109057 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g112114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g117068 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11257 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g03700 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g24337 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g32674 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05672 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g19305 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30517.t1 CRR22, Aspi01Gene30517 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene34792.t1 Aspi01Gene34792 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0001.g000142 No alias not classified & original description: CDS=1-1389 0.02 OrthoFinder output from all 47 species
Azfi_s0021.g015639 No alias not classified & original description: CDS=1-1713 0.02 OrthoFinder output from all 47 species
Azfi_s0035.g025575 CRR2 not classified & original description: CDS=1-1563 0.03 OrthoFinder output from all 47 species
Azfi_s0037.g026000 No alias not classified & original description: CDS=1-2334 0.04 OrthoFinder output from all 47 species
Azfi_s0043.g026960 No alias not classified & original description: CDS=1-4971 0.02 OrthoFinder output from all 47 species
Azfi_s0046.g030178 No alias ssDNA-binding protein *(OSB) & original description: CDS=82-2832 0.03 OrthoFinder output from all 47 species
Azfi_s0062.g035255 No alias not classified & original description: CDS=1-1599 0.02 OrthoFinder output from all 47 species
Azfi_s0072.g036890 No alias not classified & original description: CDS=1-1833 0.04 OrthoFinder output from all 47 species
Azfi_s0095.g043572 No alias not classified & original description: CDS=1-2958 0.02 OrthoFinder output from all 47 species
Azfi_s0095.g043616 No alias not classified & original description: CDS=1-3288 0.02 OrthoFinder output from all 47 species
Azfi_s0166.g054406 No alias not classified & original description: CDS=1-3468 0.05 OrthoFinder output from all 47 species
Azfi_s0168.g054598 No alias not classified & original description: CDS=1-1869 0.01 OrthoFinder output from all 47 species
Azfi_s0191.g057023 No alias not classified & original description: CDS=1-2787 0.01 OrthoFinder output from all 47 species
Azfi_s0223.g058847 CRR22 not classified & original description: CDS=1-1773 0.03 OrthoFinder output from all 47 species
Azfi_s0380.g067373 No alias not classified & original description: CDS=1-3669 0.01 OrthoFinder output from all 47 species
Azfi_s1107.g097662 No alias not classified & original description: CDS=1-2811 0.02 OrthoFinder output from all 47 species
Cba_g04052 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05882 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07049 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19394 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20834 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g24173 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g27524 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g35072 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35199 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77967 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G011400.1 Ceric.03G011400 not classified & original description: pacid=50571389... 0.03 OrthoFinder output from all 47 species
Ceric.05G065200.1 Ceric.05G065200 not classified & original description: pacid=50577782... 0.02 OrthoFinder output from all 47 species
Ceric.10G025700.1 VAC1, ECB2,... not classified & original description: pacid=50613326... 0.03 OrthoFinder output from all 47 species
Ceric.18G069700.1 CRR2, Ceric.18G069700 not classified & original description: pacid=50622363... 0.02 OrthoFinder output from all 47 species
Ceric.20G086100.1 Ceric.20G086100 not classified & original description: pacid=50566462... 0.03 OrthoFinder output from all 47 species
Ceric.29G081800.1 VAC1, ECB2,... not classified & original description: pacid=50624309... 0.02 OrthoFinder output from all 47 species
Ceric.35G034300.1 Ceric.35G034300 not classified & original description: pacid=50581547... 0.04 OrthoFinder output from all 47 species
Dcu_g05628 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05649 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05745 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06410 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g08252 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08553 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08876 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13517 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g21472 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g21476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g22451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25892 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g38524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45852 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47858 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g05964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13211 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19712 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g21509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23030 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g30238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003957001 No alias Pentatricopeptide repeat-containing protein At5g65570... 0.02 OrthoFinder output from all 47 species
GSVIVT01027525001 LPA66 Pentatricopeptide repeat-containing protein At4g21065... 0.11 OrthoFinder output from all 47 species
LOC_Os03g43420.1 OSB1, LOC_Os03g43420 ssDNA-binding protein (OSB) 0.01 OrthoFinder output from all 47 species
Len_g05435 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Len_g09267 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17572 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07805 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g38362 OSB3 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.02 OrthoFinder output from all 47 species
Nbi_g19073 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g21281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g37581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38625 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ore_g27030 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g01657 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05441 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20473 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g28575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g31906 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g38691 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g39036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g43031 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57716 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g63633 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63660 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05632 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07605 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g22234 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29087 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g29380 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33094 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48447 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56302 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61518 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000500 CRR22 not classified & original description: CDS=1-1614 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002051 REME1 not classified & original description: CDS=1-1467 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003168 CRR22 not classified & original description: CDS=1-2031 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004227 No alias not classified & original description: CDS=1-2520 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004386 No alias not classified & original description: CDS=1-2367 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007241 No alias protein S-acyltransferase *(PAT22) & original... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015555 No alias not classified & original description: CDS=1-2496 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021986 No alias not classified & original description: CDS=164-3082 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0215.g026034 OTP84 not classified & original description: CDS=2081-4369 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0260.g026882 No alias not classified & original description: CDS=1-687 0.01 OrthoFinder output from all 47 species
Sam_g02496 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06558 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g07051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11635 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g12347 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g13564 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g13631 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g13656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13838 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g14278 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g17751 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g24509 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27930 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g28767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g32958 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34092 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g35469 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g36161 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g36592 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo123450 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Smo89343 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
Spa_g18446 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g22905 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51341 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g52415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g27180 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g30403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR046848 E_motif 74 110
IPR002885 Pentatricopeptide_repeat 24 55
No external refs found!