Msp_g13541


Description : not classified & original description: none


Gene families : OG0008376 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008376_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g13541
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AT3G63430 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Adi_g024641 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g044143 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g059403 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25879 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05253 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene16300.t1 Aspi01Gene16300 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0090.g042777 No alias not classified & original description: CDS=403-4626 0.03 OrthoFinder output from all 47 species
Cba_g03406 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.29G051300.1 Ceric.29G051300 not classified & original description: pacid=50624992... 0.04 OrthoFinder output from all 47 species
Dcu_g12861 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os11g37670.1 LOC_Os11g37670 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g07810 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g58060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18718 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017468 No alias not classified & original description: CDS=1410-4154 0.03 OrthoFinder output from all 47 species
Sam_g02110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g43969 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11230 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR025486 DUF4378 1243 1451
No external refs found!