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  5. Msp_g13726

Msp_g13726 (PIR1, MAP1, AUX1, WAV5)


Aliases : PIR1, MAP1, AUX1, WAV5

Description : auxin transporter *(AUX/LAX) & original description: none


Gene families : OG0000450 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000450_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g13726

Target Alias Description ECC score Gene Family Method Actions
Adi_g010901 LAX3 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06052 LAX2 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07362 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g08567 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g13220 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g58740 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02757 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_22661 LAX3 auxin transporter (AUX/LAX) 0.02 OrthoFinder output from all 47 species
LOC_Os05g37470.1 PIR1, MAP1,... auxin transporter (AUX/LAX) 0.02 OrthoFinder output from all 47 species
MA_10293595g0010 PIR1, MAP1, AUX1, WAV5 auxin transporter (AUX/LAX) 0.04 OrthoFinder output from all 47 species
Msp_g48312 LAX1 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Smo127494 LAX1 Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Smo79053 LAX3 Solute transport.carrier-mediated transport.APC... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 46 439
No external refs found!