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  5. Msp_g13801

Msp_g13801


Description : E3 ubiquitin ligase *(RMA/MUSE) & original description: none


Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g13801

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00264430 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00048p00164020 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT4G27470 RMA3, ATRMA3 RING membrane-anchor 3 0.04 OrthoFinder output from all 47 species
Ceric.10G009900.1 Ceric.10G009900 E3 ubiquitin ligase *(RMA/MUSE) & original description:... 0.07 OrthoFinder output from all 47 species
Ceric.18G045500.1 Ceric.18G045500 E3 ubiquitin ligase *(RMA/MUSE) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.30G056300.1 Ceric.30G056300 E3 ubiquitin ligase *(RMA/MUSE) & original description:... 0.03 OrthoFinder output from all 47 species
Cre17.g739100 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Dac_g09740 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18993 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01002819001 RMA3, ATRMA3 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
GSVIVT01014361001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
LOC_Os04g44820.1 RMA3, ATRMA3,... RING-HC-class E3 ligase 0.02 OrthoFinder output from all 47 species
Len_g06314 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g14740.1 No alias RING-HC-class E3 ligase 0.02 OrthoFinder output from all 47 species
Nbi_g26676 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008785 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: CDS=1-708 0.03 OrthoFinder output from all 47 species
Sam_g45037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g089870.3.1 Solyc02g089870 RING-HC-class E3 ligase 0.04 OrthoFinder output from all 47 species
Solyc12g010670.1.1 RMA3, ATRMA3,... RING-HC-class E3 ligase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 40 82
No external refs found!