Msp_g13948


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g13948

Target Alias Description ECC score Gene Family Method Actions
Ala_g16565 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g17033 EMB2261 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g18613 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g22784 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g28513 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g33723 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36200 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g36543 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g04420 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18519 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54958 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02534 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04619 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g30401 DOT4 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g32918 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67654 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68114 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0011.g012554 No alias not classified & original description: CDS=1-2283 0.06 OrthoFinder output from all 47 species
Cba_g21419 EMB2744 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.13G015700.1 Ceric.13G015700 not classified & original description: pacid=50636078... 0.05 OrthoFinder output from all 47 species
Ceric.22G042200.1 Ceric.22G042200 not classified & original description: pacid=50614742... 0.05 OrthoFinder output from all 47 species
Dac_g05707 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g15083 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g18289 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g18405 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19052 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g22073 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23263 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g25215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25289 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g28766 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g31874 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35634 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g36003 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g04309 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g09279 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g13067 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g18565 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18911 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g26566 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g34466 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g27962 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g31921 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03029 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10306 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02826 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03105 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g03356 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g03414 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12561 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12988 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g13363 MEF22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17821 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g19632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20232 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g60422 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63500 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63902 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06488 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g08791 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29437 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31855 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g35971 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g36007 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g39647 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g43570 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g44704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53560 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53925 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g13872 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g20187 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23985 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g24048 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g30211 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g32763 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g33278 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53142 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55036 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03531 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g05566 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13479 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g17467 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g23377 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g26897 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g26900 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30253 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g34472 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g44639 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 212 259
IPR002885 Pentatricopeptide_repeat 615 664
IPR002885 Pentatricopeptide_repeat 414 461
IPR002885 Pentatricopeptide_repeat 313 360
IPR002885 Pentatricopeptide_repeat 516 561
IPR002885 Pentatricopeptide_repeat 110 158
IPR002885 Pentatricopeptide_repeat 388 407
IPR002885 Pentatricopeptide_repeat 489 510
IPR002885 Pentatricopeptide_repeat 589 614
IPR002885 Pentatricopeptide_repeat 184 207
IPR002885 Pentatricopeptide_repeat 287 308
No external refs found!