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  5. Msp_g14136

Msp_g14136 (SPT)


Aliases : SPT

Description : bHLH-type transcription factor & original description: none


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g14136
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00241810 CIB1,... External stimuli response.light.UV-A/blue... 0.03 OrthoFinder output from all 47 species
AT2G43010 SRL2, PIF4, AtPIF4 phytochrome interacting factor 4 0.02 OrthoFinder output from all 47 species
AT5G61270 PIF7 phytochrome-interacting factor7 0.06 OrthoFinder output from all 47 species
Ala_g39083 SPT bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g05555 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene00480.t1 Aspi01Gene00480 regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene72623.t1 Aspi01Gene72623 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Azfi_s0038.g026209 No alias bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g19851 SPT bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.13G024600.1 PIL5, PIF1,... bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.18G086200.1 RSL2, Ceric.18G086200 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.31G051300.1 LRL3, Ceric.31G051300 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g11196 SPT bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g05786 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007914001 PIF7 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01011873001 No alias External stimuli response.light.UV-A/blue... 0.03 OrthoFinder output from all 47 species
LOC_Os05g04740.2 PIF3, POC1,... transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
LOC_Os10g40740.1 UNE10, LOC_Os10g40740 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Mp5g18910.1 HEC1 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Msp_g25781 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33206 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ore_g44898 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11202 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18085 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g09963 HEC1 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g63750 SPT bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g20059 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Smo405220 HEC1 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Spa_g31061 SPT bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g38881 SPT bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 322 368
No external refs found!