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  5. Msp_g14171

Msp_g14171 (ATVLN2, VLN2)


Aliases : ATVLN2, VLN2

Description : villin actin-crosslinking factor & original description: none


Gene families : OG0000479 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000479_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Msp_g14171

Target Alias Description ECC score Gene Family Method Actions
AT2G41740 ATVLN2, VLN2 villin 2 0.03 OrthoFinder output from all 47 species
AT5G57320 VLN5 villin, putative 0.04 OrthoFinder output from all 47 species
Ala_g12394 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20997 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g50439 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38086 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0277.g061478 ATVLN3, VLN3 villin actin-crosslinking factor & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g05233 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Cre12.g524400 VLN4, ATVLN4 No description available 0.02 OrthoFinder output from all 47 species
Dcu_g04950 ATVLN3, VLN3 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07151 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08632 ATVLN3, VLN3 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_25295 VLN4, ATVLN4 villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Gb_31397 ATVLN3, VLN3 villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Gb_40777 ATVLN3, VLN3 villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
MA_10430359g0030 ATVLN2, VLN2 Villin-2 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Mp1g24640.1 ATVLN3, VLN3 villin actin-crosslinking factor 0.02 OrthoFinder output from all 47 species
Nbi_g04428 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g12930 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g60064 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55666 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05651 ATVLN2, VLN2 villin acTin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
BP GO:0007010 cytoskeleton organization IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR007123 Gelsolin-like_dom 267 335
IPR007123 Gelsolin-like_dom 149 217
IPR007123 Gelsolin-like_dom 29 111
IPR007123 Gelsolin-like_dom 412 483
IPR007123 Gelsolin-like_dom 639 710
IPR007123 Gelsolin-like_dom 534 601
IPR003128 Villin_headpiece 905 940
No external refs found!