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  5. Msp_g14582

Msp_g14582


Description : solute transporter *(AAAP) & original description: none


Gene families : OG0000278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000278_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g14582
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00061580 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.05 OrthoFinder output from all 47 species
AMTR_s00019p00168610 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.06 OrthoFinder output from all 47 species
AT2G41190 No alias Transmembrane amino acid transporter family protein 0.03 OrthoFinder output from all 47 species
AT3G09330 No alias Transmembrane amino acid transporter family protein 0.03 OrthoFinder output from all 47 species
Als_g47786 No alias solute transporter *(AAAP) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08482 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31436 No alias solute transporter *(AAAP) & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene10985.t1 Aspi01Gene10985 solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16673.t1 Aspi01Gene16673 solute transporter *(AAAP) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene50143.t1 Aspi01Gene50143 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64720.t1 Aspi01Gene64720 solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0120.g046809 No alias solute transporter *(AAAP) & original description: CDS=42-1736 0.03 OrthoFinder output from all 47 species
Ceric.31G038800.1 Ceric.31G038800 solute transporter *(AAAP) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.38G016600.1 Ceric.38G016600 solute transporter *(AAAP) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g04866 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06345 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g31336 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08582 No alias solute transporter *(AAAP) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26363 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04820 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17279 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28882 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019976001 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
GSVIVT01020261001 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
GSVIVT01033627001 No alias Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
GSVIVT01033628001 No alias Amino acid transporter AVT1A OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_00870 No alias Amino acid transporter AVT1H OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_00871 No alias solute transporter (AAAP) 0.03 OrthoFinder output from all 47 species
LOC_Os01g40410.1 LOC_Os01g40410 solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species
LOC_Os02g01100.1 LOC_Os02g01100 solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species
LOC_Os04g38660.1 LOC_Os04g38660 solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species
LOC_Os04g38670.1 LOC_Os04g38670 Amino acid transporter AVT1I OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os04g38680.1 LOC_Os04g38680 solute transporter (AAAP) 0.03 OrthoFinder output from all 47 species
Mp3g17580.1 No alias solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species
Msp_g09047 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06244 No alias solute transporter *(AAAP) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g19402 No alias solute transporter *(AAAP) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19449 No alias solute transporter *(AAAP) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g25905 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36554 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04230 No alias solute transporter *(AAAP) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g09068 No alias solute transporter *(AAAP) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31949 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32905 No alias solute transporter *(AAAP) & original description: none 0.04 OrthoFinder output from all 47 species
Smo405495 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Solyc03g078150.3.1 Solyc03g078150 solute transporter (AAAP) 0.04 OrthoFinder output from all 47 species
Solyc09g098380.3.1 Solyc09g098380 solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species
Solyc10g084830.2.1 Solyc10g084830 solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species
Spa_g52548 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07839 No alias solute transporter *(AAAP) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13490 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20653 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28133 No alias solute transporter *(AAAP) & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e020612_P001 Zm00001e020612 solute transporter (AAAP) 0.03 OrthoFinder output from all 47 species
Zm00001e030719_P001 Zm00001e030719 solute transporter (AAAP) 0.03 OrthoFinder output from all 47 species
Zm00001e039154_P004 Zm00001e039154 solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 82 465
No external refs found!