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  5. Msp_g14678

Msp_g14678 (ABCB19, ATABCB19,...)


Aliases : ABCB19, ATABCB19, MDR1, MDR11, ATPGP19, ATMDR1, ATMDR11, PGP19

Description : subfamily ABCB transporter & original description: none


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g14678
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00254310 ABCB19,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AMTR_s00048p00046670 PGP2,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AMTR_s00056p00132920 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AMTR_s00076p00195870 PGP1, ABCB1,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AT1G28010 ABCB14, ATABCB14, PGP14 P-glycoprotein 14 0.03 OrthoFinder output from all 47 species
AT3G28360 PGP16 P-glycoprotein 16 0.02 OrthoFinder output from all 47 species
AT3G28860 ABCB19,... ATP binding cassette subfamily B19 0.03 OrthoFinder output from all 47 species
Adi_g010407 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g012284 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g021749 ABCB19,... subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g20043 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07132 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25151 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g26174 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05763 ABCB19,... subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07131 ABCB19,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07511 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18811 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33230 ABCB14, ATABCB14, PGP14 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g19030 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g24610 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g33802 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g32929 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15960.t1 Aspi01Gene15960 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32170.t1 ABCB14,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0010.g012029 ABCB19,... subfamily ABCB transporter & original description: CDS=121-4035 0.03 OrthoFinder output from all 47 species
Azfi_s0039.g026389 PGP11 subfamily ABCB transporter & original description: CDS=323-4378 0.04 OrthoFinder output from all 47 species
Azfi_s2496.g111845 ABCB19,... subfamily ABCB transporter & original description: CDS=142-3066 0.03 OrthoFinder output from all 47 species
Cba_g01329 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07645 PGP13 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38324 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G049900.1 PGP11, Ceric.14G049900 subfamily ABCB transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.35G032800.1 ABCB19,... subfamily ABCB transporter & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.36G025500.1 PGP2, Ceric.36G025500 subfamily ABCB transporter & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g03829 ABCB19,... subfamily ABCB transporter & original description: none 0.08 OrthoFinder output from all 47 species
Dac_g06724 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10485 ABCB14, ATABCB14, PGP14 subfamily ABCB transporter & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g14063 PGP11 subfamily ABCB transporter & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g43354 ABCB19,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g41879 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28462 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000580001 No alias ABC transporter B family member 15 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01009946001 ABCB14, ATABCB14, PGP14 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
GSVIVT01013125001 PGP2 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
GSVIVT01021365001 PGP9 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Gb_32487 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os02g46680.1 PGP2, LOC_Os02g46680 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os04g38570.1 ABCB19,... auxin efflux transporter (ABCB19) 0.03 OrthoFinder output from all 47 species
LOC_Os08g45030.1 PGP1, ABCB1,... subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
MA_10431815g0020 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
MA_114017g0010 No alias subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
MA_126766g0010 PGP2 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
MA_1824g0010 No alias Putative multidrug resistance protein OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_18863g0020 PGP3, MDR3 ABC transporter B family member 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_79399g0010 No alias Putative multidrug resistance protein OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_9148200g0010 No alias ABC transporter B family member 15 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_934204g0010 No alias subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
Mp2g02910.1 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Mp2g06270.1 PGP20 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Mp2g11920.1 ABCB19,... subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Nbi_g03862 ABCB19,... subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g28031 ABCB19,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32847 PGP21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35743 No alias subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g04001 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014291 PGP2 subfamily ABCB transporter & original description: CDS=1-4248 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020710 ABCB19,... not classified & original description: CDS=1-1380 0.05 OrthoFinder output from all 47 species
Sam_g03721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo169182 ATPGP4, PGP4, ABCB4, MDR4 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo176522 ATPGP4, PGP4, ABCB4, MDR4 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Smo99885 No alias Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Solyc02g087870.3.1 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Solyc03g005860.4.1 PGP11, Solyc03g005860 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Solyc03g093650.3.1 Solyc03g093650 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Solyc08g076720.4.1 PGP2, Solyc08g076720 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Spa_g06203 PGP13 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18285 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18839 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g19381 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47519 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08541 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003866_P001 PGP1, ABCB1,... subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Zm00001e014797_P002 Zm00001e014797 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Zm00001e017444_P002 PGP21, Zm00001e017444 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Zm00001e020073_P001 ATPGP4, PGP4,... subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Zm00001e023274_P001 PGP2, Zm00001e023274 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Zm00001e025438_P001 PGP21, Zm00001e025438 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Zm00001e041760_P001 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004797 thymidine kinase activity IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0019136 deoxynucleoside kinase activity IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
MF GO:0019206 nucleoside kinase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 1104 1252
IPR003439 ABC_transporter-like_ATP-bd 447 595
IPR011527 ABC1_TM_dom 105 377
IPR011527 ABC1_TM_dom 763 1035
No external refs found!