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  5. Msp_g14693

Msp_g14693


Description : not classified & original description: none


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g14693

Target Alias Description ECC score Gene Family Method Actions
AT3G60080 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
Adi_g012553 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Adi_g020451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066616 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Adi_g103586 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g03172 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08904 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g13383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03081 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aob_g27273 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aop_g14605 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene33056.t1 Aspi01Gene33056 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0132.g049293 No alias not classified & original description: CDS=1-1575 0.03 OrthoFinder output from all 47 species
Cba_g37733 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G095600.1 Ceric.07G095600 not classified & original description: pacid=50626992... 0.03 OrthoFinder output from all 47 species
Ceric.14G083100.1 Ceric.14G083100 not classified & original description: pacid=50633279... 0.04 OrthoFinder output from all 47 species
Dac_g04251 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g07739 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05540 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Dcu_g09357 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dcu_g09533 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g32754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19575 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g27311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_22125 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_30381 RHC1A Probable E3 ubiquitin-protein ligase RHC2A... 0.03 OrthoFinder output from all 47 species
Len_g22017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24820 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g27734 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Nbi_g13924 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g10220 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g01325 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g30226 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sam_g05103 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g17099 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo18753 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Solyc05g018050.1.1 Solyc05g018050 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc12g008440.1.1 Solyc12g008440 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g06543 RHC1A not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09700 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g20368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08969 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e003411_P001 Zm00001e003411 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e016135_P001 Zm00001e016135 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e027319_P001 Zm00001e027319 E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Zm00001e038273_P001 Zm00001e038273 E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 207 249
IPR039525 RNF126-like_zinc-ribbon 6 35
No external refs found!