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  5. Msp_g15172

Msp_g15172


Description : not classified & original description: none


Gene families : OG0000279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000279_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g15172
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT1G09155 PP2-B15, AtPP2-B15 phloem protein 2-B15 0.03 OrthoFinder output from all 47 species
AT1G56250 PP2-B14, AtPP2-B14 phloem protein 2-B14 0.02 OrthoFinder output from all 47 species
AT2G02250 AtPP2-B2, PP2-B2 phloem protein 2-B2 0.02 OrthoFinder output from all 47 species
AT2G02300 PP2-B5, AtPP2-B5 phloem protein 2-B5 0.02 OrthoFinder output from all 47 species
AT4G19840 PP2-A1,... phloem protein 2-A1 0.03 OrthoFinder output from all 47 species
AT4G19850 ATPP2-A2, PP2-A2, PP2A2 lectin-related 0.03 OrthoFinder output from all 47 species
Aev_g08542 PP2-A15, AtPP2-A15 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene55186.t1 AtPP2-B8,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021680.22 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01012084001 PP2-A1,... Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01019854001 PP2-A11, AtPP2-A11 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Gb_37180 MEE66 F-box protein At2g02240 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os12g03740.1 AtPP2-B10,... F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g24670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430103g0010 AtPP2-B10, PP2-B10 F-box protein PP2-B1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10434357g0020 PP2-B15, AtPP2-B15 F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp1g08180.1 No alias F-box protein PP2-A15 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Ore_g33762 PP2-A15, AtPP2-A15 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g38746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g100010.3.1 PP2-B15,... F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc02g031750.3.1 PP2-A1,... Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc02g069020.3.1 PP2-A1,... Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc02g069030.3.1 PP2-A1,... Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e034748_P001 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR025886 PP2-like 141 319
No external refs found!