Msp_g15800


Description : not classified & original description: none


Gene families : OG0001458 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001458_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g15800

Target Alias Description ECC score Gene Family Method Actions
AT3G50340 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 OrthoFinder output from all 47 species
Aop_g09078 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25159.t1 Aspi01Gene25159 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07043 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_20863 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g36820.1 LOC_Os08g36820 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g09609 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_6965168g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g20803 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g016005 No alias not classified & original description: CDS=1-1116 0.04 OrthoFinder output from all 47 species
Tin_g09733 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e003795_P001 Zm00001e003795 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e022139_P001 Zm00001e022139 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043138 3'-5' DNA helicase activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!