Msp_g15863


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g15863

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00153950 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
AMTR_s00010p00262470 OTP85 Pentatricopeptide repeat-containing protein At2g02980,... 0.02 OrthoFinder output from all 47 species
AMTR_s00025p00244370 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g05340... 0.05 OrthoFinder output from all 47 species
AMTR_s00032p00219990 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
AMTR_s00065p00031420 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g33680... 0.02 OrthoFinder output from all 47 species
AMTR_s00068p00031610 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Ala_g28133 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Als_g30790 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aob_g17095 OTP84 not classified & original description: none 0.12 OrthoFinder output from all 47 species
Aob_g19927 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27293 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g27295 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aob_g28639 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g40241 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene34816.t1 Aspi01Gene34816 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36110.t1 CRR22, Aspi01Gene36110 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06200 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G107500.1 Ceric.01G107500 not classified & original description: pacid=50592273... 0.04 OrthoFinder output from all 47 species
Ceric.02G053100.1 Ceric.02G053100 not classified & original description: pacid=50584513... 0.04 OrthoFinder output from all 47 species
Ceric.04G059600.1 Ceric.04G059600 not classified & original description: pacid=50632178... 0.06 OrthoFinder output from all 47 species
Ceric.07G009100.1 Ceric.07G009100 not classified & original description: pacid=50626585... 0.05 OrthoFinder output from all 47 species
Ceric.09G007000.1 Ceric.09G007000 not classified & original description: pacid=50586983... 0.1 OrthoFinder output from all 47 species
Ceric.14G064000.1 Ceric.14G064000 not classified & original description: pacid=50634231... 0.05 OrthoFinder output from all 47 species
Ceric.14G077900.1 Ceric.14G077900 not classified & original description: pacid=50634382... 0.06 OrthoFinder output from all 47 species
Ceric.17G079000.1 Ceric.17G079000 not classified & original description: pacid=50617699... 0.07 OrthoFinder output from all 47 species
Ceric.19G049000.1 Ceric.19G049000 not classified & original description: pacid=50576332... 0.05 OrthoFinder output from all 47 species
Ceric.20G043000.1 EMB2758, Ceric.20G043000 not classified & original description: pacid=50565995... 0.08 OrthoFinder output from all 47 species
Ceric.23G013400.1 Ceric.23G013400 not classified & original description: pacid=50609831... 0.07 OrthoFinder output from all 47 species
Ceric.25G017100.1 OTP86, Ceric.25G017100 not classified & original description: pacid=50593496... 0.04 OrthoFinder output from all 47 species
Ceric.26G066800.1 EMB2758, Ceric.26G066800 not classified & original description: pacid=50599100... 0.07 OrthoFinder output from all 47 species
Ceric.28G070600.1 Ceric.28G070600 not classified & original description: pacid=50569629... 0.06 OrthoFinder output from all 47 species
Ceric.34G057700.1 CRR2, Ceric.34G057700 not classified & original description: pacid=50623387... 0.06 OrthoFinder output from all 47 species
Ceric.35G058500.1 Ceric.35G058500 not classified & original description: pacid=50581681... 0.05 OrthoFinder output from all 47 species
Ceric.36G048700.1 Ceric.36G048700 not classified & original description: pacid=50569051... 0.04 OrthoFinder output from all 47 species
Ceric.39G007300.1 Ceric.39G007300 not classified & original description: pacid=50582343... 0.07 OrthoFinder output from all 47 species
Ceric.39G028600.1 Ceric.39G028600 not classified & original description: pacid=50582938... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021035.24 No alias Pentatricopeptide repeat-containing protein At1g63080,... 0.01 OrthoFinder output from all 47 species
Dac_g05441 RARE1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g13278 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g40749 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
LOC_Os03g62400.1 LOC_Os03g62400 Pentatricopeptide repeat-containing protein At3g13880... 0.02 OrthoFinder output from all 47 species
Len_g03784 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g18417 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g54934 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g13272 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g40116 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g27030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06693 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18809 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006567 No alias not classified & original description: CDS=1-2706 0.04 OrthoFinder output from all 47 species
Spa_g06160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12249 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14320 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14545 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22756 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22837 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g25999 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g32768 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g33733 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48095 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53275 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g54147 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54482 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g56737 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 200 230
IPR002885 Pentatricopeptide_repeat 308 327
IPR002885 Pentatricopeptide_repeat 172 197
IPR002885 Pentatricopeptide_repeat 334 380
IPR002885 Pentatricopeptide_repeat 233 280
No external refs found!