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  5. Msp_g17025

Msp_g17025 (ATTCP24, TCP24)


Aliases : ATTCP24, TCP24

Description : TCP-type transcription factor & original description: none


Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g17025

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene55173.t1 TCP2, Aspi01Gene55173 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g04803 TCP3 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo89227 TCP2 RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
Solyc07g053410.4.1 TCP4, MEE35,... transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Solyc08g048370.4.1 TCP2, Solyc08g048370 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 109 210
No external refs found!