Msp_g17141


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g17141
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00035580 No alias Pentatricopeptide repeat-containing protein At5g44230... 0.02 OrthoFinder output from all 47 species
Adi_g034179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g03970 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26414 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010932 REME1 not classified & original description: CDS=1-1479 0.03 OrthoFinder output from all 47 species
Cba_g04046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67772 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G006200.1 Ceric.01G006200 not classified & original description: pacid=50592341... 0.03 OrthoFinder output from all 47 species
Dac_g28478 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g44606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05749 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46467 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g23295 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os08g06490.2 SLO1, LOC_Os08g06490 Pentatricopeptide repeat-containing protein At4g22760... 0.02 OrthoFinder output from all 47 species
Len_g17732 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g43648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g50232 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11189 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g23160 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34228 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06314 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24920 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12577 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57544 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g60756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63504 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30593 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13037 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33128 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003060 No alias not classified & original description: CDS=1-2058 0.03 OrthoFinder output from all 47 species
Spa_g07138 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23974 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43664 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 86 132
IPR002885 Pentatricopeptide_repeat 187 234
IPR002885 Pentatricopeptide_repeat 289 336
IPR002885 Pentatricopeptide_repeat 264 288
IPR002885 Pentatricopeptide_repeat 366 388
IPR002885 Pentatricopeptide_repeat 394 408
No external refs found!