1. Home
  2. Species
  3. Microlepia speluncae
  4. Sequence
  5. Msp_g17277

Msp_g17277 (TUA6)


Aliases : TUA6

Description : alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer & original description: none


Gene families : OG0000233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000233_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g17277
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00254750 TOR2, TUA4,... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
AMTR_s00068p00090790 TUA3,... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
AT1G04820 TOR2, TUA4 tubulin alpha-4 chain 0.02 OrthoFinder output from all 47 species
AT1G64740 TUA1 alpha-1 tubulin 0.04 OrthoFinder output from all 47 species
AT4G14960 TUA6 Tubulin/FtsZ family protein 0.02 OrthoFinder output from all 47 species
AT5G19770 TUA3 tubulin alpha-3 0.06 OrthoFinder output from all 47 species
AT5G19780 TUA5 tubulin alpha-5 0.05 OrthoFinder output from all 47 species
Adi_g017319 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Adi_g017320 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Adi_g017321 TUA6 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g022919 TUA6 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Adi_g088318 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Adi_g102765 TUA6 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Aev_g05984 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ala_g06368 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ala_g16980 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ala_g23348 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Ala_g31827 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Als_g06169 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Als_g08220 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.1 OrthoFinder output from all 47 species
Als_g10639 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Als_g14338 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Als_g47452 TUA6 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Als_g57469 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Aop_g04158 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Aop_g19224 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Aop_g27000 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Aop_g60213 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Aop_g62084 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Aop_g62975 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Aop_g70011 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.08 OrthoFinder output from all 47 species
Aop_g70531 TUA6 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Aspi01Gene04513.t1 TOR2, TUA4,... alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Aspi01Gene63957.t1 TUA3, Aspi01Gene63957 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g15077 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ceric.06G074000.1 TUA6, Ceric.06G074000 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Ceric.10G045000.1 TUA6, Ceric.10G045000 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Ceric.21G070800.1 TOR2, TUA4,... alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ceric.24G052000.1 TOR2, TUA4,... alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ceric.33G063200.1 TOR2, TUA4,... alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Dac_g10504 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Dac_g12327 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Dac_g22398 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Dac_g35651 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Dcu_g09742 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Dcu_g14320 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Dcu_g17258 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
GSVIVT01006470001 TOR2, TUA4 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
GSVIVT01009258001 TOR2, TUA4 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
GSVIVT01011382001 TOR2, TUA4 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
GSVIVT01033415001 TUA3 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
GSVIVT01037046001 TOR2, TUA4 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Gb_00907 TOR2, TUA4 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.04 OrthoFinder output from all 47 species
Gb_07962 TOR2, TUA4 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
LOC_Os03g51600.1 TOR2, TUA4,... component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
LOC_Os07g38730.1 TUA3, LOC_Os07g38730 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.04 OrthoFinder output from all 47 species
LOC_Os11g14220.1 TUA6, LOC_Os11g14220 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.05 OrthoFinder output from all 47 species
Len_g12228 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Len_g26529 TUA6 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
MA_184192g0010 TOR2, TUA4 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.04 OrthoFinder output from all 47 species
MA_273360g0010 TOR2, TUA4 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
MA_93486g0010 TUA3 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Mp2g23500.1 TOR2, TUA4 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.05 OrthoFinder output from all 47 species
Mp4g00550.1 TUA3 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
Mp8g12620.1 TUA6 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
Nbi_g05279 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Nbi_g05775 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.08 OrthoFinder output from all 47 species
Nbi_g06679 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ore_g03977 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Pir_g03063 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Pp3c25_1010V3.1 TUA3, Pp3c25_1010 tubulin alpha-5 0.01 OrthoFinder output from all 47 species
Pp3c9_24320V3.1 TOR2, TUA4, Pp3c9_24320 tubulin alpha-4 chain 0.02 OrthoFinder output from all 47 species
Ppi_g11595 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Ppi_g13625 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Ppi_g14945 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Ppi_g28726 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Ppi_g57594 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0122.g021435 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0181.g024832 TOR2, TUA4 not classified & original description: CDS=104-1579 0.05 OrthoFinder output from all 47 species
Sam_g09229 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Sam_g09230 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Sam_g16660 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Sam_g35588 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Sam_g35589 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Smo178975 TOR2, TUA4 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Smo227365 TOR2, TUA4 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Smo230143 TOR2, TUA4 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Smo232506 TOR2, TUA4 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Solyc02g087880.3.1 TUA6, Solyc02g087880 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
Solyc04g077020.3.1 TUA6, Solyc04g077020 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Spa_g04259 TOR2, TUA4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04277 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Spa_g05097 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Spa_g05098 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Spa_g07521 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Spa_g10039 TUA6 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Spa_g10040 TUA6 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Spa_g17285 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Spa_g26675 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Spa_g45671 TUA6 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Spa_g47009 TUA6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05549 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Tin_g05948 TUA6 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Tin_g09529 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Tin_g19059 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Tin_g21555 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Zm00001e012118_P001 TUA6, Zm00001e012118 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP HCCA
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005664 nuclear origin of replication recognition complex IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0007265 Ras protein signal transduction IEP HCCA
BP GO:0007266 Rho protein signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 1 61
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 111 240
No external refs found!