Msp_g17431


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g17431

Target Alias Description ECC score Gene Family Method Actions
AT2G36730 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g034338 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g18046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42177 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06520 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g03973 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g08796 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11250 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16331 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16471 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16738 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16770 CRR22 not classified & original description: none 0.12 OrthoFinder output from all 47 species
Aop_g25532 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g26368 No alias ssDNA-binding protein *(OSB) & original description: none 0.11 OrthoFinder output from all 47 species
Aop_g26732 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g28495 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g33556 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g67674 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g67863 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g67889 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68065 CRR22 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g68696 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g29457 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75325 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g13534 No alias ssDNA-binding protein *(OSB) & original description: none 0.08 OrthoFinder output from all 47 species
Dac_g35587 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g35851 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g05771 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16368 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g28511 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g12147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008656001 No alias Pentatricopeptide repeat-containing protein At5g50990... 0.03 OrthoFinder output from all 47 species
Len_g01813 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g03845 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04805 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g09438 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18054 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g23124 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g30376 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g23480 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28389 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g32824 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g37271 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g41140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g27236 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013331 No alias not classified & original description: CDS=1-2106 0.08 OrthoFinder output from all 47 species
Sam_g13068 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g01739 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000621_P001 CRR22, Zm00001e000621 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 123 170
IPR002885 Pentatricopeptide_repeat 21 68
IPR002885 Pentatricopeptide_repeat 226 273
No external refs found!