Msp_g17452


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g17452

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00067180 EMB2261,... Pentatricopeptide repeat-containing protein At2g46050,... 0.01 OrthoFinder output from all 47 species
AT5G43790 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g004488 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069094 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12353 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03503 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g23671 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g27066 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g38453 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene02505.t1 Aspi01Gene02505 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene25991.t1 CRR22, Aspi01Gene25991 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene33092.t1 Aspi01Gene33092 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene33810.t1 Aspi01Gene33810 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene42294.t1 Aspi01Gene42294 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene57016.t1 Aspi01Gene57016 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene63483.t1 CRR22, Aspi01Gene63483 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64067.t1 MEF19, Aspi01Gene64067 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64841.t1 Aspi01Gene64841 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66850.t1 Aspi01Gene66850 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68781.t1 MEF21, Aspi01Gene68781 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene70773.t1 OTP84, Aspi01Gene70773 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000396 No alias not classified & original description: CDS=1-2745 0.02 OrthoFinder output from all 47 species
Azfi_s0040.g026628 No alias not classified & original description: CDS=1-2499 0.01 OrthoFinder output from all 47 species
Azfi_s0731.g084096 No alias not classified & original description: CDS=1-3909 0.02 OrthoFinder output from all 47 species
Cba_g05963 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06563 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g07008 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07721 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13544 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g13662 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g14102 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20635 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20874 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g25572 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29359 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29926 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g66997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67693 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77657 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g77980 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.04G097800.1 Ceric.04G097800 not classified & original description: pacid=50631082... 0.01 OrthoFinder output from all 47 species
Ceric.23G046500.1 Ceric.23G046500 not classified & original description: pacid=50610423... 0.03 OrthoFinder output from all 47 species
Ceric.27G010800.1 Ceric.27G010800 not classified & original description: pacid=50606194... 0.04 OrthoFinder output from all 47 species
Dcu_g09752 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g35980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22519 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Dde_g28210 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g01382 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g25603 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g37832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03408 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05006 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06232 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06634 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06660 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06726 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07063 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07120 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g07121 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07641 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07681 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07711 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07725 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07738 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07748 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07766 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07824 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12096 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14746 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g15268 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g15303 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g16815 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g19989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g22363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g30026 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g32670 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33322 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g35606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g35700 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38587 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
MA_79624g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.07 OrthoFinder output from all 47 species
Msp_g03544 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g07709 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g17283 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g21437 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g22918 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g23174 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24971 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28217 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g28478 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28795 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g28803 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g30522 OTP81 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33082 REME1 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Msp_g34496 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g34538 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g38951 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Msp_g40180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46048 RARE1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g07710 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g09158 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15249 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007041 No alias ssDNA-binding protein *(OSB) & original description: CDS=241-3261 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009196 No alias not classified & original description: CDS=1-579 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010549 No alias not classified & original description: CDS=364-2607 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0086.g018425 No alias not classified & original description: CDS=1-2226 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0090.g018727 No alias not classified & original description: CDS=1-2163 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0098.g019493 No alias not classified & original description: CDS=1-3789 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0225.g026308 CRR22 ssDNA-binding protein *(OSB) & original description: CDS=95-2287 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 124 170
IPR002885 Pentatricopeptide_repeat 226 273
IPR002885 Pentatricopeptide_repeat 22 68
IPR046848 E_motif 345 400
IPR002885 Pentatricopeptide_repeat 300 326
IPR002885 Pentatricopeptide_repeat 98 120
IPR002885 Pentatricopeptide_repeat 200 222
No external refs found!