Msp_g17460


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g17460
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00217860 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Ala_g38174 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03349 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20700 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17103 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17259 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22335 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01005260001 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.02 OrthoFinder output from all 47 species
GSVIVT01017823001 No alias Pentatricopeptide repeat-containing protein At2g36980,... 0.02 OrthoFinder output from all 47 species
Pir_g08857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c17_4890V3.1 Pp3c17_4890 mitochondrial editing factor 22 0.01 OrthoFinder output from all 47 species
Ppi_g18941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53952 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo228785 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.03 OrthoFinder output from all 47 species
Smo83339 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
Tin_g05893 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06117 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28271 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 282 329
IPR002885 Pentatricopeptide_repeat 181 227
IPR002885 Pentatricopeptide_repeat 384 431
No external refs found!