Msp_g17723


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g17723

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00080380 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g59720,... 0.03 OrthoFinder output from all 47 species
Aev_g06254 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g42281 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g44160 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g48329 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g06656 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g13562 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g22420 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25155 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35641 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g19032 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28195 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02865 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g08133 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g08870 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16384 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g17318 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17427 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g17428 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21473 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21628 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28711 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g33592 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38034 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g38925 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g43685 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25991.t2 Aspi01Gene25991 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene34758.t1 Aspi01Gene34758 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0119.g046740 No alias not classified & original description: CDS=1-2259 0.05 OrthoFinder output from all 47 species
Cba_g06233 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g46020 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67737 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.07G059900.1 Ceric.07G059900 not classified & original description: pacid=50627027... 0.05 OrthoFinder output from all 47 species
Ceric.07G078100.1 OTP84, Ceric.07G078100 not classified & original description: pacid=50626860... 0.05 OrthoFinder output from all 47 species
Ceric.07G098300.1 CRR22, Ceric.07G098300 not classified & original description: pacid=50626946... 0.06 OrthoFinder output from all 47 species
Ceric.09G023600.1 Ceric.09G023600 not classified & original description: pacid=50587368... 0.04 OrthoFinder output from all 47 species
Ceric.11G067400.1 Ceric.11G067400 not classified & original description: pacid=50595438... 0.04 OrthoFinder output from all 47 species
Ceric.19G076100.1 Ceric.19G076100 not classified & original description: pacid=50575482... 0.06 OrthoFinder output from all 47 species
Ceric.1Z045400.1 Ceric.1Z045400 not classified & original description: pacid=50637450... 0.05 OrthoFinder output from all 47 species
Ceric.1Z201600.1 Ceric.1Z201600 not classified & original description: pacid=50565787... 0.06 OrthoFinder output from all 47 species
Ceric.22G042200.1 Ceric.22G042200 not classified & original description: pacid=50614742... 0.05 OrthoFinder output from all 47 species
Ceric.26G046300.1 Ceric.26G046300 not classified & original description: pacid=50599602... 0.05 OrthoFinder output from all 47 species
Ceric.28G015100.1 Ceric.28G015100 not classified & original description: pacid=50570923... 0.05 OrthoFinder output from all 47 species
Ceric.28G065700.1 CRR22, Ceric.28G065700 not classified & original description: pacid=50569957... 0.05 OrthoFinder output from all 47 species
Ceric.33G002700.1 Ceric.33G002700 not classified & original description: pacid=50606600... 0.04 OrthoFinder output from all 47 species
Ceric.33G061000.1 OTP84, Ceric.33G061000 not classified & original description: pacid=50606666... 0.06 OrthoFinder output from all 47 species
Ceric.36G051900.1 Ceric.36G051900 not classified & original description: pacid=50568048... 0.04 OrthoFinder output from all 47 species
Ceric.39G053500.1 Ceric.39G053500 not classified & original description: pacid=50582600... 0.05 OrthoFinder output from all 47 species
Dac_g03843 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g04259 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g04615 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g04694 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05104 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g05656 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05743 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g08356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g09690 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g09743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11806 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g12138 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g13534 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g14137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14167 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g18416 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g18761 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20337 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23801 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24893 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g25237 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25258 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25283 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25284 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28137 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29194 CRR2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g29963 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g30123 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30156 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g30289 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g31126 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31776 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35068 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g35870 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g36035 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g36371 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g36655 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g38008 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g42650 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g42987 DOT4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g43213 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dac_g43240 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43765 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43925 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g45106 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g45699 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g45949 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g53877 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10433543g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_124868g0020 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_138689g0010 OTP84 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
Msp_g07585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g12984 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g16238 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g17711 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28205 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g36814 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g40180 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g18027 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38632 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g14351 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g03458 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g22252 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c17_4890V3.1 Pp3c17_4890 mitochondrial editing factor 22 0.02 OrthoFinder output from all 47 species
Ppi_g05869 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g06149 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17397 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g47779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g49216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57466 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g08102 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g16791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g33990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06334 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23982 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g44142 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g44754 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45045 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55537 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04184 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06120 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06632 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17805 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g19943 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44315 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g46045 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 404 428
IPR002885 Pentatricopeptide_repeat 302 324
IPR002885 Pentatricopeptide_repeat 225 272
IPR002885 Pentatricopeptide_repeat 328 374
IPR002885 Pentatricopeptide_repeat 429 476
IPR002885 Pentatricopeptide_repeat 21 68
IPR002885 Pentatricopeptide_repeat 124 170
No external refs found!