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  5. Msp_g18242

Msp_g18242 (UBQ11)


Aliases : UBQ11

Description : UBQ ubiquitin-fold protein & original description: none


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g18242

Target Alias Description ECC score Gene Family Method Actions
Als_g23100 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene20737.t1 UBQ11, Aspi01Gene20737 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57837.t1 UBQ10, Aspi01Gene57837 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g28034 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34959 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g69243 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g79067 UBQ11 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g79077 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.08G062600.1 UBQ10, Ceric.08G062600 UBQ ubiquitin-fold protein & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.12G071800.1 UBQ11, Ceric.12G071800 UBQ ubiquitin-fold protein & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.22G046000.1 UBQ7, RUB2,... not classified & original description: pacid=50614635... 0.03 OrthoFinder output from all 47 species
Dde_g36803 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g41473 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g29490 RUB1, ATRUB1, NEDD8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g06640.1 UBQ10, LOC_Os02g06640 ubiquitin-fold protein (UBQ) 0.03 OrthoFinder output from all 47 species
Len_g44195 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Len_g52324 RUB1, ATRUB1, NEDD8 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g07527 RUB1, ATRUB1, NEDD8 RUB ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
MA_5869456g0010 UBQ11 Polyubiquitin 12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_702665g0010 No alias Ubiquitin-40S ribosomal protein S27a-1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Mp6g16040.1 No alias Ubiquitin-40S ribosomal protein S27a OS=Hordeum vulgare... 0.04 OrthoFinder output from all 47 species
Ppi_g48171 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Smo162003 UBQ14 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Solyc11g005650.1.1 Solyc11g005650 Ubiquitin-60S ribosomal protein L40 OS=Brassica rapa... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 79 150
IPR000626 Ubiquitin-like_dom 3 74
No external refs found!