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  5. Msp_g18729

Msp_g18729


Description : not classified & original description: none


Gene families : OG0000289 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000289_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g18729
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00020p00030660 evm_27.TU.AmTr_v1... Cytochrome b561 and DOMON domain-containing protein... 0.02 OrthoFinder output from all 47 species
AMTR_s00055p00147440 evm_27.TU.AmTr_v1... Cytochrome b561 and DOMON domain-containing protein... 0.02 OrthoFinder output from all 47 species
AT3G07570 No alias Cytochrome b561/ferric reductase transmembrane with... 0.02 OrthoFinder output from all 47 species
AT3G59070 No alias Cytochrome b561/ferric reductase transmembrane with... 0.03 OrthoFinder output from all 47 species
AT3G61750 No alias Cytochrome b561/ferric reductase transmembrane with... 0.05 OrthoFinder output from all 47 species
Aev_g37311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g38521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0064.g035659 No alias not classified & original description: CDS=1-945 0.03 OrthoFinder output from all 47 species
Ceric.10G059700.1 Ceric.10G059700 not classified & original description: pacid=50612710... 0.04 OrthoFinder output from all 47 species
Ceric.14G052700.1 Ceric.14G052700 not classified & original description: pacid=50633452... 0.02 OrthoFinder output from all 47 species
Ceric.19G021000.1 Ceric.19G021000 not classified & original description: pacid=50576072... 0.03 OrthoFinder output from all 47 species
Ceric.22G071600.1 Ceric.22G071600 not classified & original description: pacid=50615348... 0.03 OrthoFinder output from all 47 species
Dac_g00664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06980 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13198 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001902001 No alias Cytochrome b561 and DOMON domain-containing protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01006721001 No alias Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01027122001 No alias Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01030038001 No alias Cytochrome b561 and DOMON domain-containing protein... 0.05 OrthoFinder output from all 47 species
GSVIVT01031635001 No alias Cytochrome b561 and DOMON domain-containing protein... 0.05 OrthoFinder output from all 47 species
Gb_20590 No alias Cytochrome b561 and DOMON domain-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os01g67030.1 LOC_Os01g67030 Cytochrome b561 and DOMON domain-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os03g09900.1 LOC_Os03g09900 Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os05g48270.1 LOC_Os05g48270 Cytochrome b561 and DOMON domain-containing protein... 0.04 OrthoFinder output from all 47 species
LOC_Os08g41290.1 AIR12, LOC_Os08g41290 Auxin-induced in root cultures protein 12 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os09g32470.1 LOC_Os09g32470 Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g09599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14931 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_316656g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_589691g0010 No alias Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
Nbi_g00892 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g22186 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0155.g023596 No alias not classified & original description: CDS=456-1649 0.02 OrthoFinder output from all 47 species
Solyc03g031570.4.1 Solyc03g031570 Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc06g082860.4.1 Solyc06g082860 Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc07g048050.3.1 Solyc07g048050 Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc09g019980.3.1 Solyc09g019980 Cytochrome b561 and DOMON domain-containing protein... 0.04 OrthoFinder output from all 47 species
Solyc09g097890.2.1 Solyc09g097890 Cytochrome b561 and DOMON domain-containing protein... 0.04 OrthoFinder output from all 47 species
Solyc10g009480.4.1 Solyc10g009480 Cytochrome b561 and DOMON domain-containing protein... 0.04 OrthoFinder output from all 47 species
Solyc11g012420.2.1 Solyc11g012420 Cytochrome b561 and DOMON domain-containing protein... 0.02 OrthoFinder output from all 47 species
Spa_g22063 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25926 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000798_P001 Zm00001e000798 Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e000803_P001 Zm00001e000803 Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e010141_P001 Zm00001e010141 Cytochrome b561 and DOMON domain-containing protein... 0.02 OrthoFinder output from all 47 species
Zm00001e026478_P001 Zm00001e026478 Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e034602_P002 Zm00001e034602 Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR006593 Cyt_b561/ferric_Rdtase_TM 234 356
IPR045265 AIR12_DOMON 106 210
No external refs found!