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  5. Msp_g19205

Msp_g19205 (AFB2)


Aliases : AFB2

Description : substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) & original description: none


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Msp_g19205

Target Alias Description ECC score Gene Family Method Actions
Adi_g023634 AFB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g046270 AFB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18642 TIR1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g28117 AFB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02846 COI1 component *(COI) of jasmonic acid receptor complex &... 0.04 OrthoFinder output from all 47 species
Ehy_g02828 COI1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03881 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Ehy_g07920 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Ppi_g05861 COI1 component *(COI) of jasmonic acid receptor complex &... 0.04 OrthoFinder output from all 47 species
Sam_g28215 No alias substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Solyc06g008780.3.1 TIR1, Solyc06g008780 component TIR1/AFB of auxin receptor complex. component... 0.02 OrthoFinder output from all 47 species
Spa_g05728 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e000649_P001 Zm00001e000649 component TIR1/AFB of auxin receptor complex. component... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 206 225
IPR001611 Leu-rich_rpt 532 552
IPR041567 COI1_F-box 60 99
IPR041101 Transp_inhibit 118 164
No external refs found!