Msp_g19474 (PUM7, APUM7)

Aliases : PUM7, APUM7

Description : not classified & original description: none

Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g19474
Cluster	HCCA: Cluster_139

Target	Alias	Description	ECC score	Gene Family Method	Actions
Dcu_g13050	APUM12, PUM12	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e024450_P001	APUM12, PUM12,...	Pumilio homolog 12 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001313	Pumilio_RNA-bd_rpt	875	900
IPR001313	Pumilio_RNA-bd_rpt	695	721
IPR001313	Pumilio_RNA-bd_rpt	837	871
IPR001313	Pumilio_RNA-bd_rpt	618	652
IPR001313	Pumilio_RNA-bd_rpt	803	820
IPR001313	Pumilio_RNA-bd_rpt	730	762
IPR001313	Pumilio_RNA-bd_rpt	654	685
IPR001313	Pumilio_RNA-bd_rpt	765	798

External Links

No external refs found!