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  5. Msp_g19710

Msp_g19710


Description : E3 ubiquitin ligase *(AIRP1) & original description: none


Gene families : OG0000892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000892_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g19710
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00036270 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
LOC_Os07g41930.1 LOC_Os07g41930 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_940417g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pir_g40928 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g068680.1.1 Solyc02g068680 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc04g082940.3.1 Solyc04g082940 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR004146 DC1 110 155
IPR004146 DC1 3 46
IPR001841 Znf_RING 434 476
No external refs found!