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  5. Msp_g19819

Msp_g19819


Description : not classified & original description: none


Gene families : OG0000154 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000154_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g19819

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00130370 JAS1, JAZ10,... RNA biosynthesis.transcriptional activation.TIFY... 0.02 OrthoFinder output from all 47 species
AT1G19180 TIFY10A, JAZ1 jasmonate-zim-domain protein 1 0.02 OrthoFinder output from all 47 species
Adi_g011403 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g19183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g35434 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g47157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05825 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g20519 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34593.t1 TIFY10B, JAZ2,... TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G035700.1 JAZ9, TIFY7,... TIFY-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g16744 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
LOC_Os03g28940.1 TIFY10B, JAZ2,... component JAZ of jasmonic acid receptor complex.... 0.03 OrthoFinder output from all 47 species
MA_10426545g0010 JAZ11, TIFY3A transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
MA_10430801g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g00663 JAZ4, TIFY6A TIFY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g43497 JAZ4, TIFY6A TIFY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g39408 No alias TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g34218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01553 PPD2, TIFY4B TIFY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR018467 CCT_CS 171 190
IPR010399 Tify_dom 12 35
No external refs found!