Msp_g19890 (GATA12)

Aliases : GATA12

Description : transcription factor *(A/B-GATA) & original description: none

Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g19890

Target	Alias	Description	ECC score	Gene Family Method
AT4G34680	GATA3	GATA transcription factor 3	0.02	OrthoFinder output from all 47 species
Als_g07273	GATA12	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g20978	GATA9	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene10302.t2	GATA23, Aspi01Gene10302	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g02619	GATA2	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.04G070700.1	GATA20, Ceric.04G070700	transcription factor *(A/B-GATA) & original description:...	0.05	OrthoFinder output from all 47 species
Ceric.25G025900.1	GATA9, Ceric.25G025900	transcription factor *(A/B-GATA) & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g06612	GATA9	transcription factor *(A/B-GATA) & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g34018	GATA12	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g21727	GATA1	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01033385001	GATA9	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
LOC_Os02g12790.1	GATA22, CGA1,...	transcription factor (GATA)	0.04	OrthoFinder output from all 47 species
LOC_Os05g44400.1	GATA12, LOC_Os05g44400	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
Len_g08386	GATA12	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g12909	GATA5	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g26719	GATA9	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g30519	GATA2	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g45079	GATA9	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006622	GATA4	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016909	GATA9	transcription factor *(A/B-GATA) & original description:...	0.04	OrthoFinder output from all 47 species
Spa_g45626	GATA12	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g11799	GATA9	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e016165_P001	BME3-ZF, BME3,...	transcription factor (GATA)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	371	404

External Links

No external refs found!

Msp_g19890 (GATA12)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation