Msp_g20028

Description : component *(eL22) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0000996 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000996_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g20028
Cluster	HCCA: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00069p00189250	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
AT3G05560	No alias	Ribosomal L22e protein family	0.06	OrthoFinder output from all 47 species
AT5G27770	No alias	Ribosomal L22e protein family	0.08	OrthoFinder output from all 47 species
Adi_g077282	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Aop_g10541	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Azfi_s0005.g009357	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Ceric.08G045600.1	Ceric.08G045600	component *(eL22) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Ceric.26G014800.1	Ceric.26G014800	component *(eL22) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 47 species
Cre07.g357850	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
Dac_g14500	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
GSVIVT01028021001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
GSVIVT01031130001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.06	OrthoFinder output from all 47 species
GSVIVT01031158001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
GSVIVT01035141001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
Gb_08874	No alias	component RPL22 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Gb_36164	No alias	component RPL22 of LSU proteome component	0.03	OrthoFinder output from all 47 species
LOC_Os03g22340.1	LOC_Os03g22340	component RPL22 of LSU proteome component	0.06	OrthoFinder output from all 47 species
LOC_Os07g47710.1	LOC_Os07g47710	component RPL22 of LSU proteome component	0.05	OrthoFinder output from all 47 species
MA_130453g0010	No alias	component RPL22 of LSU proteome component	0.05	OrthoFinder output from all 47 species
Mp4g02920.1	No alias	component RPL22 of LSU proteome component	0.05	OrthoFinder output from all 47 species
Msp_g03306	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Pp3c11_630V3.1	Pp3c11_630	Ribosomal L22e protein family	0.03	OrthoFinder output from all 47 species
Pp3c1_120V3.1	Pp3c1_120	Ribosomal L22e protein family	0.04	OrthoFinder output from all 47 species
Pp3c2_28500V3.1	Pp3c2_28500	Ribosomal L22e protein family	0.03	OrthoFinder output from all 47 species
Pp3c2_28510V3.1	Pp3c2_28510	Ribosomal L22e protein family	0.03	OrthoFinder output from all 47 species
Ppi_g24808	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g30822	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g32149	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Solyc01g099830.3.1	Solyc01g099830	component RPL22 of LSU proteome component	0.07	OrthoFinder output from all 47 species
Solyc09g075150.3.1	Solyc09g075150	component RPL22 of LSU proteome component	0.05	OrthoFinder output from all 47 species
Solyc09g075155.1.1	Solyc09g075155	component RPL22 of LSU proteome component	0.05	OrthoFinder output from all 47 species
Spa_g22846	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Spa_g25050	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Tin_g36488	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Zm00001e010958_P001	Zm00001e010958	component RPL22 of LSU proteome component	0.07	OrthoFinder output from all 47 species
Zm00001e035835_P001	Zm00001e035835	component RPL22 of LSU proteome component	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006754	ATP biosynthetic process	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098798	mitochondrial protein-containing complex	IEP	HCCA
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002671	Ribosomal_L22e	45	154

External Links

No external refs found!

Msp_g20028

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation