Msp_g20115 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g20115

Target Alias Description ECC score Gene Family Method Actions
Adi_g015420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24418 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g02232 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g03649 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g04200 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g11928 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16784 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g20156 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g20814 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g23571 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23676 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23762 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23956 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g25544 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g26688 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28004 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g28154 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28399 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g28413 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28698 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28712 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g33227 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g33237 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g61281 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g68032 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68048 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g68065 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g68098 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0009.g011917 No alias not classified & original description: CDS=1-393 0.06 OrthoFinder output from all 47 species
Dac_g42852 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07693 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g40972 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g16105 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26090 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31027 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17712 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g42421 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g05844 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g16742 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g20499 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g32044 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g06239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30107 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g33764 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g44848 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g48495 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001819 OTP86 not classified & original description: CDS=1-3381 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003613 No alias not classified & original description: CDS=279-3914 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004577 No alias not classified & original description: CDS=1-1743 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007679 OTP86 not classified & original description: CDS=1-4497 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0091.g018780 No alias not classified & original description: CDS=1-2574 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0093.g019124 No alias not classified & original description: CDS=1-405 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0207.g025786 No alias not classified & original description: CDS=42-3869 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0231.g026446 No alias not classified & original description: CDS=292-2991 0.03 OrthoFinder output from all 47 species
Sam_g17656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12223 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14009 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14257 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g15589 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23061 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g23962 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g26356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g27883 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g33278 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g45259 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54465 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06102 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17792 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g21956 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g31399 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 505 534
IPR002885 Pentatricopeptide_repeat 374 397
IPR002885 Pentatricopeptide_repeat 476 501
IPR002885 Pentatricopeptide_repeat 298 344
IPR002885 Pentatricopeptide_repeat 196 244
IPR002885 Pentatricopeptide_repeat 399 446
No external refs found!