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  5. Msp_g20155

Msp_g20155


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g20155

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00155170 CRR2,... Pentatricopeptide repeat-containing protein At3g46790,... 0.02 OrthoFinder output from all 47 species
Aob_g40241 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.23G038700.1 Ceric.23G038700 not classified & original description: pacid=50609782... 0.04 OrthoFinder output from all 47 species
Dcu_g06410 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07066 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g26397 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g14704 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g04601 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06697 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_127785g0010 REME1 Pentatricopeptide repeat-containing protein At3g24000,... 0.05 OrthoFinder output from all 47 species
MA_136326g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
MA_57048g0010 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.02 OrthoFinder output from all 47 species
Pir_g20600 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.09 OrthoFinder output from all 47 species
Pir_g64858 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g31968 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53286 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g53556 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53976 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e014800_P001 OTP82, Zm00001e014800 Pentatricopeptide repeat-containing protein At2g29760,... 0.03 OrthoFinder output from all 47 species
Zm00001e019971_P001 Zm00001e019971 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 428 476
IPR002885 Pentatricopeptide_repeat 529 577
IPR002885 Pentatricopeptide_repeat 327 375
IPR002885 Pentatricopeptide_repeat 226 274
IPR046849 Eplus_motif 713 736
IPR032867 DYW_dom 752 835
IPR002885 Pentatricopeptide_repeat 604 626
IPR002885 Pentatricopeptide_repeat 403 427
No external refs found!