Msp_g20716 (ATCSLD3, KJK, CSLD3)

Aliases : ATCSLD3, KJK, CSLD3

Description : mannan synthase *(CSLD) & original description: none

Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g20716

Target	Alias	Description	ECC score	Gene Family Method
Aop_g03236	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Aop_g21811	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Azfi_s0182.g056403	MUR10, ATCESA7,...	not classified & original description: CDS=1-1620	0.02	OrthoFinder output from all 47 species
GSVIVT01007038001	ATCSLE1, CSLE1	Cellulose synthase-like protein E1 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
GSVIVT01030458001	CSLB04, ATCSLB4, ATCSLB04	Cellulose synthase-like protein H1 OS=Oryza sativa...	0.06	OrthoFinder output from all 47 species
LOC_Os07g36700.1	ATCSLD2, CSLD2,...	D-glucan synthase (CSLF)	0.09	OrthoFinder output from all 47 species
MA_415945g0010	ATCSLB05, CSLB05, ATCSLB5	Cellulose synthase-like protein B5 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Mp2g02440.1	ATCSLD3, KJK, CSLD3	mannan synthase (CSLD)	0.02	OrthoFinder output from all 47 species
Zm00001e008117_P005	CSLB04, ATCSLB4,...	D-glucan synthase (CSLH)	0.03	OrthoFinder output from all 47 species
Zm00001e018517_P001	ATCSLG2, CSLG2,...	Cellulose synthase-like protein G2 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	752	1136
IPR005150	Cellulose_synth	387	745

External Links

No external refs found!

Msp_g20716 (ATCSLD3, KJK, CSLD3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation