Aliases : CIP111
Description : platform ATPase CDC48 & original description: none
Gene families : OG0000324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000324_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Msp_g20925 | |
| Cluster | HCCA: Cluster_31 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00040p00198390 | CIP111,... | Calmodulin-interacting protein 111 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00095p00091200 | CIP111,... | Calmodulin-interacting protein 111 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene27196.t1 | emb1354, CDC48C,... | platform ATPase CDC48 & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.16G061700.1 | emb1354, CDC48C,... | platform ATPase CDC48 & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g07885 | No alias | platform ATPase CDC48 & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g09970 | No alias | platform ATPase CDC48 & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g20500.1 | CDC48B | Cell division control protein 48 homolog B... | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g13004 | No alias | platform ATPase CDC48 & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g08291 | emb1354, CDC48C | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53020 | emb1354, CDC48C | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo89456 | emb1354, CDC48C | Cell division control protein 48 homolog C... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005524 | ATP binding | IEA | Interproscan |
| MF | GO:0016887 | ATP hydrolysis activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006265 | DNA topological change | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0071103 | DNA conformation change | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| No external refs found! |
