Msp_g21580 (WRKY4)

Aliases : WRKY4

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g21580
Cluster	HCCA: Cluster_145

Target	Alias	Description	ECC score	Gene Family Method
AT2G04880	WRKY1, ZAP1, ATWRKY1	zinc-dependent activator protein-1	0.03	OrthoFinder output from all 47 species
AT4G18170	WRKY28, ATWRKY28	WRKY DNA-binding protein 28	0.02	OrthoFinder output from all 47 species
Adi_g021107	WRKY33, ATWRKY33	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g22671	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g39081	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene00111.t1	WRKY53,...	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g15580	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os01g47560.1	ATWRKY71,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Lfl_g24750	AtWRKY41, WRKY41	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Mp6g16800.1	WRKY48, ATWRKY48	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Msp_g15358	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g06217	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g29855	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Solyc04g056365.1.1	Solyc04g056365	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Solyc06g068460.3.1	ATWRKY40,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e016669_P001	ATWRKY13,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e018502_P001	WRKY49,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	300	356

External Links

No external refs found!

Msp_g21580 (WRKY4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation